BLASTX nr result

ID: Coptis24_contig00035365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035365
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34563.3| unnamed protein product [Vitis vinifera]              191   4e-47
emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]   191   4e-47
ref|XP_002273163.2| PREDICTED: uncharacterized basic helix-loop-...   171   4e-41
ref|XP_002446947.1| hypothetical protein SORBIDRAFT_06g025650 [S...   171   4e-41
dbj|BAJ91406.1| predicted protein [Hordeum vulgare subsp. vulgare]    171   6e-41

>emb|CBI34563.3| unnamed protein product [Vitis vinifera]
          Length = 868

 Score =  191 bits (486), Expect = 4e-47
 Identities = 95/132 (71%), Positives = 107/132 (81%), Gaps = 6/132 (4%)
 Frame = +1

Query: 1    EPKIIGNENGVILKDNSSGG------GATWAFEVGGQTMVCPIIVEDMNPPGQMLVEMLC 162
            EPK+IG+ENGV+LKDNSSGG      GATWAFEV GQTMVCPI VED+NPPGQML+EMLC
Sbjct: 708  EPKLIGHENGVVLKDNSSGGSGNSGGGATWAFEVSGQTMVCPIRVEDLNPPGQMLIEMLC 767

Query: 163  EERGYFLEIADTIRGFGLTILKGVMEVREDKIWARFIVETNRTITRMEIFLSXXXXXXXX 342
            EE+G+FLEIAD IR FGL ILKGVMEVRE+KIWARFIVE NR +TRM+IFLS        
Sbjct: 768  EEQGFFLEIADIIRSFGLNILKGVMEVRENKIWARFIVEANRHVTRMDIFLSLVQLLQET 827

Query: 343  XXSGISPKNQLS 378
              +G+SP NQ S
Sbjct: 828  ATTGVSPTNQPS 839


>emb|CAN74602.1| hypothetical protein VITISV_028112 [Vitis vinifera]
          Length = 893

 Score =  191 bits (486), Expect = 4e-47
 Identities = 95/132 (71%), Positives = 107/132 (81%), Gaps = 6/132 (4%)
 Frame = +1

Query: 1    EPKIIGNENGVILKDNSSGG------GATWAFEVGGQTMVCPIIVEDMNPPGQMLVEMLC 162
            EPK+IG+ENGV+LKDNSSGG      GATWAFEV GQTMVCPI VED+NPPGQML+EMLC
Sbjct: 733  EPKLIGHENGVVLKDNSSGGSGNSGGGATWAFEVSGQTMVCPIRVEDLNPPGQMLIEMLC 792

Query: 163  EERGYFLEIADTIRGFGLTILKGVMEVREDKIWARFIVETNRTITRMEIFLSXXXXXXXX 342
            EE+G+FLEIAD IR FGL ILKGVMEVRE+KIWARFIVE NR +TRM+IFLS        
Sbjct: 793  EEQGFFLEIADIIRSFGLNILKGVMEVRENKIWARFIVEANRHVTRMDIFLSLVQLLQET 852

Query: 343  XXSGISPKNQLS 378
              +G+SP NQ S
Sbjct: 853  ATTGVSPTNQPS 864


>ref|XP_002273163.2| PREDICTED: uncharacterized basic helix-loop-helix protein
            At1g64625-like [Vitis vinifera]
          Length = 858

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/126 (68%), Positives = 97/126 (76%)
 Frame = +1

Query: 1    EPKIIGNENGVILKDNSSGGGATWAFEVGGQTMVCPIIVEDMNPPGQMLVEMLCEERGYF 180
            EPK+I + N        SGGGATWAFEV GQTMVCPI VED+NPPGQML+EMLCEE+G+F
Sbjct: 712  EPKVINHGN--------SGGGATWAFEVSGQTMVCPIRVEDLNPPGQMLIEMLCEEQGFF 763

Query: 181  LEIADTIRGFGLTILKGVMEVREDKIWARFIVETNRTITRMEIFLSXXXXXXXXXXSGIS 360
            LEIAD IR FGL ILKGVMEVRE+KIWARFIVE NR +TRM+IFLS          +G+S
Sbjct: 764  LEIADIIRSFGLNILKGVMEVRENKIWARFIVEANRHVTRMDIFLSLVQLLQETATTGVS 823

Query: 361  PKNQLS 378
            P NQ S
Sbjct: 824  PTNQPS 829


>ref|XP_002446947.1| hypothetical protein SORBIDRAFT_06g025650 [Sorghum bicolor]
            gi|241938130|gb|EES11275.1| hypothetical protein
            SORBIDRAFT_06g025650 [Sorghum bicolor]
          Length = 838

 Score =  171 bits (434), Expect = 4e-41
 Identities = 82/109 (75%), Positives = 94/109 (86%), Gaps = 3/109 (2%)
 Frame = +1

Query: 1    EPKIIGNENGVILKDNSSGG---GATWAFEVGGQTMVCPIIVEDMNPPGQMLVEMLCEER 171
            EPKII  E+GV+LKDN   G   GATWA+EV GQTMVCPII+ED++PPGQMLVEMLCEER
Sbjct: 683  EPKIIDKESGVVLKDNPDAGRNGGATWAYEVAGQTMVCPIIIEDLSPPGQMLVEMLCEER 742

Query: 172  GYFLEIADTIRGFGLTILKGVMEVREDKIWARFIVETNRTITRMEIFLS 318
            G FLEIAD IRGFGLTILKG ME+R+ KIW+RF+VE NR +TRM+IFLS
Sbjct: 743  GLFLEIADNIRGFGLTILKGQMELRDGKIWSRFLVEANREVTRMDIFLS 791


>dbj|BAJ91406.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 362

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/118 (70%), Positives = 98/118 (83%), Gaps = 12/118 (10%)
 Frame = +1

Query: 1   EPKIIGNENGVILKDNSSG------------GGATWAFEVGGQTMVCPIIVEDMNPPGQM 144
           EPK+I  ++G +LKDNSSG            GGATWA+EV GQTMVCPIIVED++PPGQM
Sbjct: 200 EPKMISKDSGAVLKDNSSGVVLKDNSSAASNGGATWAYEVAGQTMVCPIIVEDLSPPGQM 259

Query: 145 LVEMLCEERGYFLEIADTIRGFGLTILKGVMEVREDKIWARFIVETNRTITRMEIFLS 318
           LVEMLCEERG+FLEIADTIRGFGLTILKG+ME+R+ KI ARF+VE N+ +TRM+IFLS
Sbjct: 260 LVEMLCEERGFFLEIADTIRGFGLTILKGLMELRDGKIMARFLVEANKNVTRMDIFLS 317


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