BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035300
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27138.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|NP_197702.1| C3HC4-type RING finger domain-containing protei...   137   7e-31
ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyra...   135   4e-30
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ...   134   6e-30
ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212...   134   6e-30

>emb|CBI27138.3| unnamed protein product [Vitis vinifera]
          Length = 3960

 Score =  145 bits (365), Expect = 4e-33
 Identities = 71/122 (58%), Positives = 90/122 (73%)
 Frame = +2

Query: 2   SRQAYSEDDISSMFVQLYEEGVFTLLFLKNIVSVEMYVWNPGASSPQRLYSCSVSSQNEE 181
           SRQAY EDDISSMFVQLYEEGVF LLFLK+++S+EMY W+ G   P+++YSC+VSS N++
Sbjct: 214 SRQAYLEDDISSMFVQLYEEGVFALLFLKSVLSIEMYTWDAGEPDPRKIYSCTVSSANDD 273

Query: 182 TVWHRQALRRLXXXXXXXXXXXXXXXLDFLCESNVGSQLEKNVSSFFIVQAMASKSSRIG 361
           TV HRQAL RL               LDFL E+ +G+ LEK + +F+IVQ MAS SS+IG
Sbjct: 274 TVLHRQALLRLSKTISSLKSEMDAFSLDFLSEAIIGNHLEKRIDTFYIVQKMASASSKIG 333

Query: 362 AF 367
           +F
Sbjct: 334 SF 335


>ref|NP_197702.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
           thaliana] gi|9759369|dbj|BAB09828.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332005740|gb|AED93123.1| C3HC4-type RING finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 4706

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/122 (56%), Positives = 85/122 (69%)
 Frame = +2

Query: 2   SRQAYSEDDISSMFVQLYEEGVFTLLFLKNIVSVEMYVWNPGASSPQRLYSCSVSSQNEE 181
           SRQAY EDDIS MF QL+EEGVF+LLFLK ++S+EMY W+ G S P++LYSCSVSS N +
Sbjct: 203 SRQAYFEDDISLMFDQLFEEGVFSLLFLKCVLSIEMYTWDDGDSEPKKLYSCSVSSPNND 262

Query: 182 TVWHRQALRRLXXXXXXXXXXXXXXXLDFLCESNVGSQLEKNVSSFFIVQAMASKSSRIG 361
           TVWHRQA+ RL               L+FL ES  G+Q ++    F+IVQ MAS SS+IG
Sbjct: 263 TVWHRQAVLRLSKTSISGDREMDAFTLEFLSESEKGNQTKRRTDRFYIVQTMASASSKIG 322

Query: 362 AF 367
            F
Sbjct: 323 LF 324


>ref|XP_002872036.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317873|gb|EFH48295.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 4711

 Score =  135 bits (339), Expect = 4e-30
 Identities = 68/122 (55%), Positives = 84/122 (68%)
 Frame = +2

Query: 2   SRQAYSEDDISSMFVQLYEEGVFTLLFLKNIVSVEMYVWNPGASSPQRLYSCSVSSQNEE 181
           SRQAY EDDIS MF QL+EEGVF+LLFLK ++S+EMY W+ G   P++LYSCSVSS + +
Sbjct: 203 SRQAYFEDDISLMFDQLFEEGVFSLLFLKCVLSIEMYTWDDGDPEPKKLYSCSVSSPDND 262

Query: 182 TVWHRQALRRLXXXXXXXXXXXXXXXLDFLCESNVGSQLEKNVSSFFIVQAMASKSSRIG 361
           TVWHRQA+ RL               L+FL ES  GSQ ++    F+IVQ MAS SS+IG
Sbjct: 263 TVWHRQAVLRLSKTSISGDREMDAFTLEFLSESEKGSQSQRRTDRFYIVQTMASASSKIG 322

Query: 362 AF 367
            F
Sbjct: 323 LF 324


>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
          Length = 3586

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/122 (53%), Positives = 86/122 (70%)
 Frame = +2

Query: 2   SRQAYSEDDISSMFVQLYEEGVFTLLFLKNIVSVEMYVWNPGASSPQRLYSCSVSSQNEE 181
           SRQAY+E+DISSMF +LYEEGV TLLFLK+++ +EM+VWN G + PQ+LYS S+ S N +
Sbjct: 210 SRQAYTEEDISSMFAELYEEGVLTLLFLKSVLCIEMFVWNDGETEPQKLYSFSLRSANSD 269

Query: 182 TVWHRQALRRLXXXXXXXXXXXXXXXLDFLCESNVGSQLEKNVSSFFIVQAMASKSSRIG 361
            +WHRQ L RL               L+FL ++  G+Q E+ + SFFIVQ MAS +SRIG
Sbjct: 270 IIWHRQMLLRLSKSTTSTQSEVDSFSLEFLSQAMNGTQTEERIDSFFIVQTMASTTSRIG 329

Query: 362 AF 367
           +F
Sbjct: 330 SF 331


>ref|XP_004135955.1| PREDICTED: uncharacterized protein LOC101212447 [Cucumis sativus]
          Length = 4709

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/122 (53%), Positives = 86/122 (70%)
 Frame = +2

Query: 2   SRQAYSEDDISSMFVQLYEEGVFTLLFLKNIVSVEMYVWNPGASSPQRLYSCSVSSQNEE 181
           SRQAY+E+DISSMF +LYEEGV TLLFLK+++ +EM+VWN G + PQ+LYS S+ S N +
Sbjct: 210 SRQAYTEEDISSMFAELYEEGVLTLLFLKSVLCIEMFVWNDGETEPQKLYSFSLRSANSD 269

Query: 182 TVWHRQALRRLXXXXXXXXXXXXXXXLDFLCESNVGSQLEKNVSSFFIVQAMASKSSRIG 361
            +WHRQ L RL               L+FL ++  G+Q E+ + SFFIVQ MAS +SRIG
Sbjct: 270 IIWHRQMLLRLSKSTTSTQSEVDSFSLEFLSQAMNGTQTEERIDSFFIVQTMASTTSRIG 329

Query: 362 AF 367
           +F
Sbjct: 330 SF 331