BLASTX nr result

ID: Coptis24_contig00035207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035207
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319414.1| predicted protein [Populus trichocarpa] gi|2...   117   4e-24
ref|XP_002881105.1| hypothetical protein ARALYDRAFT_481949 [Arab...   117   5e-24
ref|NP_001189638.1| allergen-related protein [Arabidopsis thalia...   117   5e-24
ref|NP_850143.1| allergen-related protein [Arabidopsis thaliana]...   117   5e-24
ref|XP_002517702.1| conserved hypothetical protein [Ricinus comm...   117   6e-24

>ref|XP_002319414.1| predicted protein [Populus trichocarpa] gi|222857790|gb|EEE95337.1|
           predicted protein [Populus trichocarpa]
          Length = 65

 Score =  117 bits (294), Expect = 4e-24
 Identities = 49/62 (79%), Positives = 53/62 (85%)
 Frame = +2

Query: 704 TLRTSRRHLNGLGSYPPRCTSKCGRCTPCKPVHVPVPPGTSAPTEYYPEAWRCKCGNKLY 883
           +L  +RR L+G GS PPRCTSKCG+CTPCKPVHVPVPPGT    EYYPEAWRCKCGNKLY
Sbjct: 4   SLSMARRFLSGPGSSPPRCTSKCGKCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 63

Query: 884 MP 889
           MP
Sbjct: 64  MP 65


>ref|XP_002881105.1| hypothetical protein ARALYDRAFT_481949 [Arabidopsis lyrata subsp.
           lyrata] gi|297326944|gb|EFH57364.1| hypothetical protein
           ARALYDRAFT_481949 [Arabidopsis lyrata subsp. lyrata]
          Length = 237

 Score =  117 bits (293), Expect = 5e-24
 Identities = 49/57 (85%), Positives = 50/57 (87%)
 Frame = +2

Query: 719 RRHLNGLGSYPPRCTSKCGRCTPCKPVHVPVPPGTSAPTEYYPEAWRCKCGNKLYMP 889
           RR L GLGS PPRC+SKCGRCTPCKPVHVPVPPGT    EYYPEAWRCKCGNKLYMP
Sbjct: 181 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 237


>ref|NP_001189638.1| allergen-related protein [Arabidopsis thaliana]
           gi|122180229|sp|Q1PEY6.1|EPFL6_ARATH RecName:
           Full=EPIDERMAL PATTERNING FACTOR-like protein 6;
           Short=EPF-like protein 6; Flags: Precursor
           gi|91806295|gb|ABE65875.1| allergen-like [Arabidopsis
           thaliana] gi|330253283|gb|AEC08377.1| allergen-related
           protein [Arabidopsis thaliana]
          Length = 156

 Score =  117 bits (293), Expect = 5e-24
 Identities = 49/57 (85%), Positives = 50/57 (87%)
 Frame = +2

Query: 719 RRHLNGLGSYPPRCTSKCGRCTPCKPVHVPVPPGTSAPTEYYPEAWRCKCGNKLYMP 889
           RR L GLGS PPRC+SKCGRCTPCKPVHVPVPPGT    EYYPEAWRCKCGNKLYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156


>ref|NP_850143.1| allergen-related protein [Arabidopsis thaliana]
           gi|330253282|gb|AEC08376.1| allergen-related protein
           [Arabidopsis thaliana]
          Length = 230

 Score =  117 bits (293), Expect = 5e-24
 Identities = 49/57 (85%), Positives = 50/57 (87%)
 Frame = +2

Query: 719 RRHLNGLGSYPPRCTSKCGRCTPCKPVHVPVPPGTSAPTEYYPEAWRCKCGNKLYMP 889
           RR L GLGS PPRC+SKCGRCTPCKPVHVPVPPGT    EYYPEAWRCKCGNKLYMP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230


>ref|XP_002517702.1| conserved hypothetical protein [Ricinus communis]
           gi|223543100|gb|EEF44634.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 75

 Score =  117 bits (292), Expect = 6e-24
 Identities = 50/62 (80%), Positives = 53/62 (85%)
 Frame = +2

Query: 704 TLRTSRRHLNGLGSYPPRCTSKCGRCTPCKPVHVPVPPGTSAPTEYYPEAWRCKCGNKLY 883
           +L T+RR L+G GS PPRC SKCG CTPCKPVHVPVPPGT   TEYYPEAWRCKCGNKLY
Sbjct: 14  SLITTRRILSGPGSSPPRCISKCGSCTPCKPVHVPVPPGTPVTTEYYPEAWRCKCGNKLY 73

Query: 884 MP 889
           MP
Sbjct: 74  MP 75


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