BLASTX nr result
ID: Coptis24_contig00035202
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035202 (548 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003601715.1| hypothetical protein MTR_3g084640 [Medicago ... 141 8e-32 ref|XP_002516401.1| conserved hypothetical protein [Ricinus comm... 135 4e-30 ref|XP_004138537.1| PREDICTED: protein PRD1-like [Cucumis sativu... 133 2e-29 emb|CBI39380.3| unnamed protein product [Vitis vinifera] 129 4e-28 ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera] 128 7e-28 >ref|XP_003601715.1| hypothetical protein MTR_3g084640 [Medicago truncatula] gi|355490763|gb|AES71966.1| hypothetical protein MTR_3g084640 [Medicago truncatula] Length = 1276 Score = 141 bits (355), Expect = 8e-32 Identities = 71/137 (51%), Positives = 99/137 (72%) Frame = -3 Query: 474 EDQXXXXXXXSQGHRTSLQLITNEGGKICLLCFTNLLSNPNSPTVHLSYALSQLSIAISH 295 ED+ SQGHR+SL L TN+GG ICL+CF+NL+SNP+SPT+H+SYALSQLS ++S Sbjct: 9 EDEGDSRWCCSQGHRSSLNLQTNQGGTICLVCFSNLISNPSSPTIHVSYALSQLSRSLSI 68 Query: 294 IPFLQNLRTFHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSDDREVELDFVARFAD 115 FL ++ TFH H L+SPL L + +DE IA Q + ++L+L S D V +FVAR +D Sbjct: 69 PQFLHSIVTFHPHFLVSPLVAALSSFDDEPIAEQLVHLILNLSASSDPSVCREFVARVSD 128 Query: 114 RLSNFSLVWSRRQIYSV 64 R+S+ +L WS RQ++S+ Sbjct: 129 RVSSGALGWSSRQLHSL 145 >ref|XP_002516401.1| conserved hypothetical protein [Ricinus communis] gi|223544499|gb|EEF46018.1| conserved hypothetical protein [Ricinus communis] Length = 1304 Score = 135 bits (340), Expect = 4e-30 Identities = 67/131 (51%), Positives = 91/131 (69%), Gaps = 2/131 (1%) Frame = -3 Query: 441 QGHRTSLQLITNE--GGKICLLCFTNLLSNPNSPTVHLSYALSQLSIAISHIPFLQNLRT 268 QGHR++L L T + +CLLCF+NL++NP +PT H+SYALSQL A+SH PFL++L + Sbjct: 26 QGHRSTLSLPTQQDHSSSLCLLCFSNLITNPRAPTFHISYALSQLLHALSHPPFLRSLLS 85 Query: 267 FHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSDDREVELDFVARFADRLSNFSLVW 88 FH H L+SPL L +D+ IARQ I +V SLCD+ D + +FV R D +S+ SL W Sbjct: 86 FHPHFLVSPLLRCLSLFDDDPIARQIIHLVTSLCDAADASICHEFVMRVGDHISSGSLAW 145 Query: 87 SRRQIYSVSNF 55 SRRQ+Y + F Sbjct: 146 SRRQVYMLHCF 156 >ref|XP_004138537.1| PREDICTED: protein PRD1-like [Cucumis sativus] gi|449496798|ref|XP_004160229.1| PREDICTED: protein PRD1-like [Cucumis sativus] Length = 1256 Score = 133 bits (335), Expect = 2e-29 Identities = 71/145 (48%), Positives = 95/145 (65%), Gaps = 4/145 (2%) Frame = -3 Query: 492 NYYTNEEDQXXXXXXXSQGHRTSLQLITNEGGKICLLCFTNLLSNPNSPTVHLSYALSQL 313 +Y + +DQ S GH +SL L T EGG ICLLCF+NL+S+P S TVH+SYALSQ Sbjct: 2 SYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQF 61 Query: 312 SIAISHIPFLQNLRTFHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSDDRE----V 145 S A+S FL+ TFHSH +++P LC+ +D IARQ +V LCD + + + Sbjct: 62 SQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDLVRRLCDVTEVDGYGSL 121 Query: 144 ELDFVARFADRLSNFSLVWSRRQIY 70 DF+ARF+DR+S+ SL WSRRQ+Y Sbjct: 122 CDDFIARFSDRISSGSLAWSRRQVY 146 >emb|CBI39380.3| unnamed protein product [Vitis vinifera] Length = 1312 Score = 129 bits (323), Expect = 4e-28 Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 1/144 (0%) Frame = -3 Query: 504 RDEENYYTNEEDQXXXXXXXSQGHRTSLQLITNEGGKICLLCFTNLLSNPNSPTVHLSYA 325 R + EE++ SQGHR++L L T EGG+ICL+CFTNLLSNP SPT H+S+A Sbjct: 17 RSGQRMMLEEEEEEVYPATCSQGHRSTLILQTMEGGRICLICFTNLLSNPTSPTFHVSHA 76 Query: 324 LSQLSIAISHIPFLQNLRTFHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSD-DRE 148 LSQLS A+SH PFL +L + H HLL+SPL + L ND IA Q I +VL L +S Sbjct: 77 LSQLSHALSHPPFLHSLLSHHPHLLVSPLLHSLSFFNDHSIASQIIHLVLFLSNSSHSSS 136 Query: 147 VELDFVARFADRLSNFSLVWSRRQ 76 + +FV+R A LS L WS RQ Sbjct: 137 LYGEFVSRIASILSGSKLHWSPRQ 160 >ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera] Length = 1291 Score = 128 bits (321), Expect = 7e-28 Identities = 72/135 (53%), Positives = 90/135 (66%), Gaps = 1/135 (0%) Frame = -3 Query: 477 EEDQXXXXXXXSQGHRTSLQLITNEGGKICLLCFTNLLSNPNSPTVHLSYALSQLSIAIS 298 EE++ SQGHR++L L T EGG+ICL+CFTNLLSNP SPT H+S+ALSQLS A+S Sbjct: 5 EEEEEVYPATCSQGHRSTLILQTMEGGRICLICFTNLLSNPTSPTFHVSHALSQLSHALS 64 Query: 297 HIPFLQNLRTFHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSD-DREVELDFVARF 121 H PFL +L + H HLL+SPL + L ND IA Q I +VL L +S + +FV+R Sbjct: 65 HPPFLHSLLSHHPHLLVSPLLHSLSFFNDHSIASQIIHLVLFLSNSSHSSSLYGEFVSRI 124 Query: 120 ADRLSNFSLVWSRRQ 76 A LS L WS RQ Sbjct: 125 ASILSGSKLHWSPRQ 139