BLASTX nr result

ID: Coptis24_contig00035202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035202
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601715.1| hypothetical protein MTR_3g084640 [Medicago ...   141   8e-32
ref|XP_002516401.1| conserved hypothetical protein [Ricinus comm...   135   4e-30
ref|XP_004138537.1| PREDICTED: protein PRD1-like [Cucumis sativu...   133   2e-29
emb|CBI39380.3| unnamed protein product [Vitis vinifera]              129   4e-28
ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera]     128   7e-28

>ref|XP_003601715.1| hypothetical protein MTR_3g084640 [Medicago truncatula]
           gi|355490763|gb|AES71966.1| hypothetical protein
           MTR_3g084640 [Medicago truncatula]
          Length = 1276

 Score =  141 bits (355), Expect = 8e-32
 Identities = 71/137 (51%), Positives = 99/137 (72%)
 Frame = -3

Query: 474 EDQXXXXXXXSQGHRTSLQLITNEGGKICLLCFTNLLSNPNSPTVHLSYALSQLSIAISH 295
           ED+       SQGHR+SL L TN+GG ICL+CF+NL+SNP+SPT+H+SYALSQLS ++S 
Sbjct: 9   EDEGDSRWCCSQGHRSSLNLQTNQGGTICLVCFSNLISNPSSPTIHVSYALSQLSRSLSI 68

Query: 294 IPFLQNLRTFHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSDDREVELDFVARFAD 115
             FL ++ TFH H L+SPL   L + +DE IA Q + ++L+L  S D  V  +FVAR +D
Sbjct: 69  PQFLHSIVTFHPHFLVSPLVAALSSFDDEPIAEQLVHLILNLSASSDPSVCREFVARVSD 128

Query: 114 RLSNFSLVWSRRQIYSV 64
           R+S+ +L WS RQ++S+
Sbjct: 129 RVSSGALGWSSRQLHSL 145


>ref|XP_002516401.1| conserved hypothetical protein [Ricinus communis]
           gi|223544499|gb|EEF46018.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1304

 Score =  135 bits (340), Expect = 4e-30
 Identities = 67/131 (51%), Positives = 91/131 (69%), Gaps = 2/131 (1%)
 Frame = -3

Query: 441 QGHRTSLQLITNE--GGKICLLCFTNLLSNPNSPTVHLSYALSQLSIAISHIPFLQNLRT 268
           QGHR++L L T +     +CLLCF+NL++NP +PT H+SYALSQL  A+SH PFL++L +
Sbjct: 26  QGHRSTLSLPTQQDHSSSLCLLCFSNLITNPRAPTFHISYALSQLLHALSHPPFLRSLLS 85

Query: 267 FHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSDDREVELDFVARFADRLSNFSLVW 88
           FH H L+SPL   L   +D+ IARQ I +V SLCD+ D  +  +FV R  D +S+ SL W
Sbjct: 86  FHPHFLVSPLLRCLSLFDDDPIARQIIHLVTSLCDAADASICHEFVMRVGDHISSGSLAW 145

Query: 87  SRRQIYSVSNF 55
           SRRQ+Y +  F
Sbjct: 146 SRRQVYMLHCF 156


>ref|XP_004138537.1| PREDICTED: protein PRD1-like [Cucumis sativus]
           gi|449496798|ref|XP_004160229.1| PREDICTED: protein
           PRD1-like [Cucumis sativus]
          Length = 1256

 Score =  133 bits (335), Expect = 2e-29
 Identities = 71/145 (48%), Positives = 95/145 (65%), Gaps = 4/145 (2%)
 Frame = -3

Query: 492 NYYTNEEDQXXXXXXXSQGHRTSLQLITNEGGKICLLCFTNLLSNPNSPTVHLSYALSQL 313
           +Y  + +DQ       S GH +SL L T EGG ICLLCF+NL+S+P S TVH+SYALSQ 
Sbjct: 2   SYDGHPDDQSIPPSSCSHGHPSSLCLHTQEGGIICLLCFSNLISDPLSSTVHVSYALSQF 61

Query: 312 SIAISHIPFLQNLRTFHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSDDRE----V 145
           S A+S   FL+   TFHSH +++P    LC+ +D  IARQ   +V  LCD  + +    +
Sbjct: 62  SQALSQPTFLRTFLTFHSHFIVAPFVAALCSFDDHSIARQLTDLVRRLCDVTEVDGYGSL 121

Query: 144 ELDFVARFADRLSNFSLVWSRRQIY 70
             DF+ARF+DR+S+ SL WSRRQ+Y
Sbjct: 122 CDDFIARFSDRISSGSLAWSRRQVY 146


>emb|CBI39380.3| unnamed protein product [Vitis vinifera]
          Length = 1312

 Score =  129 bits (323), Expect = 4e-28
 Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
 Frame = -3

Query: 504 RDEENYYTNEEDQXXXXXXXSQGHRTSLQLITNEGGKICLLCFTNLLSNPNSPTVHLSYA 325
           R  +     EE++       SQGHR++L L T EGG+ICL+CFTNLLSNP SPT H+S+A
Sbjct: 17  RSGQRMMLEEEEEEVYPATCSQGHRSTLILQTMEGGRICLICFTNLLSNPTSPTFHVSHA 76

Query: 324 LSQLSIAISHIPFLQNLRTFHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSD-DRE 148
           LSQLS A+SH PFL +L + H HLL+SPL + L   ND  IA Q I +VL L +S     
Sbjct: 77  LSQLSHALSHPPFLHSLLSHHPHLLVSPLLHSLSFFNDHSIASQIIHLVLFLSNSSHSSS 136

Query: 147 VELDFVARFADRLSNFSLVWSRRQ 76
           +  +FV+R A  LS   L WS RQ
Sbjct: 137 LYGEFVSRIASILSGSKLHWSPRQ 160


>ref|XP_002268156.2| PREDICTED: protein PRD1-like [Vitis vinifera]
          Length = 1291

 Score =  128 bits (321), Expect = 7e-28
 Identities = 72/135 (53%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
 Frame = -3

Query: 477 EEDQXXXXXXXSQGHRTSLQLITNEGGKICLLCFTNLLSNPNSPTVHLSYALSQLSIAIS 298
           EE++       SQGHR++L L T EGG+ICL+CFTNLLSNP SPT H+S+ALSQLS A+S
Sbjct: 5   EEEEEVYPATCSQGHRSTLILQTMEGGRICLICFTNLLSNPTSPTFHVSHALSQLSHALS 64

Query: 297 HIPFLQNLRTFHSHLLISPLTNLLCNCNDELIARQAISIVLSLCDSD-DREVELDFVARF 121
           H PFL +L + H HLL+SPL + L   ND  IA Q I +VL L +S     +  +FV+R 
Sbjct: 65  HPPFLHSLLSHHPHLLVSPLLHSLSFFNDHSIASQIIHLVLFLSNSSHSSSLYGEFVSRI 124

Query: 120 ADRLSNFSLVWSRRQ 76
           A  LS   L WS RQ
Sbjct: 125 ASILSGSKLHWSPRQ 139


Top