BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035149
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_003624339.1| Pentatricopeptide repeat-containing protein ...   131   7e-29
ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containi...   125   5e-27
gb|ACU18704.1| unknown [Glycine max]                                  125   5e-27

>ref|XP_002327958.1| predicted protein [Populus trichocarpa] gi|222837367|gb|EEE75746.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/98 (65%), Positives = 83/98 (84%)
 Frame = +1

Query: 1   VVEKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLG 180
           VVE+++ NC+ E Y+IV++ALC+ R VEEA  LFG+MLS ELKPKLV+YNS+ICMLCK+G
Sbjct: 270 VVEERKQNCVAEGYSIVMQALCEYRLVEEASHLFGRMLSLELKPKLVVYNSIICMLCKVG 329

Query: 181 NVDKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWE 294
            +D A R+F+IM+K+RC PD+VTYTAL+H YG A NWE
Sbjct: 330 RLDDAQRVFQIMSKKRCLPDSVTYTALVHAYGEARNWE 367


>ref|XP_004152299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449484825|ref|XP_004156991.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 579

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/99 (61%), Positives = 79/99 (79%)
 Frame = +1

Query: 1   VVEKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLG 180
           VVE  +L C EE Y++V++ALC+ R V+EA  LFG+MLSQ +KPKL +YN +ICMLCKLG
Sbjct: 365 VVEGDKLRCAEECYSVVMKALCEHRHVDEASDLFGRMLSQGMKPKLAIYNYVICMLCKLG 424

Query: 181 NVDKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWEA 297
           N+D A+R+F IMNK+RC PD+VTY+ALIH YG   +W A
Sbjct: 425 NLDSAERVFGIMNKKRCAPDHVTYSALIHAYGENRDWSA 463


>ref|XP_003624339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499354|gb|AES80557.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 578

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/98 (62%), Positives = 79/98 (80%)
 Frame = +1

Query: 1   VVEKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLG 180
           +VE+K+L C++E Y+IVI+ALCD RRVEEA +LFG+ML   LKPKLV+YNS+I MLCKLG
Sbjct: 366 IVEEKKLTCVQEGYSIVIKALCDHRRVEEAGKLFGRMLEIGLKPKLVVYNSVISMLCKLG 425

Query: 181 NVDKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWE 294
           ++D A+ +FEIMNK RC PD++TY ALIH      NW+
Sbjct: 426 DLDNANGVFEIMNKNRCFPDSITYIALIHAQCACKNWK 463


>ref|XP_003552721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 367

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/98 (59%), Positives = 75/98 (76%)
 Frame = +1

Query: 1   VVEKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLG 180
           +VE+++L  ++E Y++VI ALC+  RVEEA  LFG+MLS  LKPKLV+YNS+I MLCK G
Sbjct: 155 IVEERKLTSVQEGYSVVINALCECCRVEEASDLFGRMLSCGLKPKLVVYNSVISMLCKFG 214

Query: 181 NVDKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWE 294
            +  A R+FEIMNK RC PD +TYTALIH +G   NW+
Sbjct: 215 KLKDATRVFEIMNKNRCLPDGLTYTALIHSHGEVRNWK 252


>gb|ACU18704.1| unknown [Glycine max]
          Length = 367

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/98 (59%), Positives = 75/98 (76%)
 Frame = +1

Query: 1   VVEKKRLNCLEESYTIVIRALCDVRRVEEACQLFGQMLSQELKPKLVLYNSLICMLCKLG 180
           +VE+++L  ++E Y++VI ALC+  RVEEA  LFG+MLS  LKPKLV+YNS+I MLCK G
Sbjct: 155 IVEERKLTSVQEGYSVVINALCECCRVEEASDLFGRMLSCGLKPKLVVYNSVISMLCKFG 214

Query: 181 NVDKADRLFEIMNKRRCGPDNVTYTALIHGYGGAHNWE 294
            +  A R+FEIMNK RC PD +TYTALIH +G   NW+
Sbjct: 215 KLKDATRVFEIMNKNRCLPDGLTYTALIHSHGEVRNWK 252