BLASTX nr result

ID: Coptis24_contig00034881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034881
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|NP_001234331.1| JAB [Solanum lycopersicum] gi|12002865|gb|AA...   134   8e-30
emb|CBL87025.1| CSN5 protein [Solanum lycopersicum]                   134   8e-30
emb|CBI37693.3| unnamed protein product [Vitis vinifera]              133   1e-29
ref|XP_002283561.1| PREDICTED: COP9 signalosome complex subunit ...   133   1e-29

>ref|XP_002330805.1| predicted protein [Populus trichocarpa] gi|222872607|gb|EEF09738.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  134 bits (338), Expect = 6e-30
 Identities = 63/67 (94%), Positives = 64/67 (95%)
 Frame = +3

Query: 3   VVDPTRTVSAGKVEIGAFRTYPEGYKPAYDTVSEYQTIPLNKIEDFGVHCKQYYSLDITY 182
           V+DPTRTVSAGKVEIGAFRTYPEGYKP  D VSEYQTIPLNKIEDFGVHCKQYYSLDITY
Sbjct: 184 VIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYSLDITY 243

Query: 183 FKSSLDC 203
           FKSSLDC
Sbjct: 244 FKSSLDC 250


>ref|NP_001234331.1| JAB [Solanum lycopersicum] gi|12002865|gb|AAG43411.1| JAB [Solanum
           lycopersicum]
          Length = 367

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/67 (92%), Positives = 64/67 (95%)
 Frame = +3

Query: 3   VVDPTRTVSAGKVEIGAFRTYPEGYKPAYDTVSEYQTIPLNKIEDFGVHCKQYYSLDITY 182
           V+DPTRTVSAGKVEIGAFRTYPEGYKP  D +SEYQTIPLNKIEDFGVHCKQYYSLDITY
Sbjct: 184 VIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITY 243

Query: 183 FKSSLDC 203
           FKSSLDC
Sbjct: 244 FKSSLDC 250


>emb|CBL87025.1| CSN5 protein [Solanum lycopersicum]
          Length = 367

 Score =  134 bits (337), Expect = 8e-30
 Identities = 62/67 (92%), Positives = 64/67 (95%)
 Frame = +3

Query: 3   VVDPTRTVSAGKVEIGAFRTYPEGYKPAYDTVSEYQTIPLNKIEDFGVHCKQYYSLDITY 182
           V+DPTRTVSAGKVEIGAFRTYPEGYKP  D +SEYQTIPLNKIEDFGVHCKQYYSLDITY
Sbjct: 184 VIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPISEYQTIPLNKIEDFGVHCKQYYSLDITY 243

Query: 183 FKSSLDC 203
           FKSSLDC
Sbjct: 244 FKSSLDC 250


>emb|CBI37693.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/67 (92%), Positives = 64/67 (95%)
 Frame = +3

Query: 3   VVDPTRTVSAGKVEIGAFRTYPEGYKPAYDTVSEYQTIPLNKIEDFGVHCKQYYSLDITY 182
           V+DPTRTVSAGKVEIGAFRTYPEGYKP  D VSEYQTIPLNKIEDFGVHCKQYY+LDITY
Sbjct: 77  VIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITY 136

Query: 183 FKSSLDC 203
           FKSSLDC
Sbjct: 137 FKSSLDC 143


>ref|XP_002283561.1| PREDICTED: COP9 signalosome complex subunit 5a-like [Vitis
           vinifera]
          Length = 360

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/67 (92%), Positives = 64/67 (95%)
 Frame = +3

Query: 3   VVDPTRTVSAGKVEIGAFRTYPEGYKPAYDTVSEYQTIPLNKIEDFGVHCKQYYSLDITY 182
           V+DPTRTVSAGKVEIGAFRTYPEGYKP  D VSEYQTIPLNKIEDFGVHCKQYY+LDITY
Sbjct: 177 VIDPTRTVSAGKVEIGAFRTYPEGYKPPDDPVSEYQTIPLNKIEDFGVHCKQYYALDITY 236

Query: 183 FKSSLDC 203
           FKSSLDC
Sbjct: 237 FKSSLDC 243


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