BLASTX nr result

ID: Coptis24_contig00034846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034846
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258...    94   1e-17
ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
emb|CBI17960.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]    77   1e-12

>ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258654 [Vitis vinifera]
          Length = 877

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/120 (43%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2   YLRMMEEQAEYDVDALQKANELLAEKEQKGQDLEAELELYRGRISCEAMVEKVQVPTCDS 181
           YLRMMEEQ+EYD++ALQK N+LL EKE++ QDLEAELE YR +   E M+E    PTCD 
Sbjct: 588 YLRMMEEQSEYDMEALQKTNDLLTEKEKEMQDLEAELEFYRKKFPDETMLENTLQPTCDP 647

Query: 182 K-GGRRMEHLDVSRLIHTINTPCNTPREHSQCTRRPDKTDVVNGNTHTRITTASLVGFED 358
           K    RMEH D S + + ++ P N      +     ++ ++   + H  I   SL+  E+
Sbjct: 648 KIEDVRMEHSDASCVGNDVDVPSNVVMVKPKICDNVERKEMSFNDKHMSIMKNSLLEIEE 707


>ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|222857464|gb|EEE95011.1|
            predicted protein [Populus trichocarpa]
          Length = 954

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2    YLRMMEEQAEYDVDALQKANELLAEKEQKGQDLEAELELYRGRISCEAMVEKVQVPTCDS 181
            YLRMMEEQ+EYD +ALQK N+LL EKE++ QDLE ELE YR +   E++    Q PT D 
Sbjct: 665  YLRMMEEQSEYDTEALQKKNDLLTEKEKEVQDLEEELEFYRSKFPDESI---FQTPTSDR 721

Query: 182  K-GGRRMEHLDVSRLIHTINTPCNTPREHSQCTRRPDKTDVVNGNTHTRITTASLVGFED 358
            K  G   +H +   +  +  T  N+  E      + + T++  G+ +     +SL+ FED
Sbjct: 722  KETGSSADHSEAGWIEDSTTTNRNSVTEKPNVCHKVEATNMSLGDKNIVTVNSSLLEFED 781


>emb|CBI17960.3| unnamed protein product [Vitis vinifera]
          Length = 754

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/63 (60%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   YLRMMEEQAEYDVDALQKANELLAEKEQKGQDLEAELELYRGRISCEAMVEKVQVPTCDS 181
           YLRMMEEQAEYDV+AL+KAN+LLAE+E+  QDLEAELE YR      +++  +   TCD 
Sbjct: 481 YLRMMEEQAEYDVEALEKANDLLAEREKDIQDLEAELEFYRKEFEDRSVMANMHEETCDL 540

Query: 182 KGG 190
           K G
Sbjct: 541 KRG 543


>ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|222875257|gb|EEF12388.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
 Frame = +2

Query: 5   LRMMEEQAEYDVDALQKANELLAEKEQKGQDLEAELELYRGRISCEAMVEKVQVPTCDSK 184
           LRMMEEQAEYD++ALQK N+LL EKE++ QDLE ELE YR +   EA+ E    P  D K
Sbjct: 663 LRMMEEQAEYDMEALQKTNDLLTEKEKEVQDLEEELEFYRSKFPNEAIFE---TPISDRK 719

Query: 185 G-GRRMEHLDVSRLIHTINTPCNTPREHSQCTRRPDKTDVVNGNTHTRITTASLVGFED 358
             G R +H +   +  + +T  N+  E     ++ + T+    + +     +SL+ FED
Sbjct: 720 ATGTRADHSEAGCIEDSASTSKNSAEE-----KQVEGTNTSLADKNIITVNSSLLDFED 773


>emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]
          Length = 778

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/63 (60%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   YLRMMEEQAEYDVDALQKANELLAEKEQKGQDLEAELELYRGRISCEAMVEKVQVPTCDS 181
           YLRMMEEQAEYDV+AL+KAN+LLAE+E+  QDLEAELE YR      +++  +   TCD 
Sbjct: 522 YLRMMEEQAEYDVEALEKANDLLAEREKDIQDLEAELEFYRKEFEDRSVMANMHEETCDL 581

Query: 182 KGG 190
           K G
Sbjct: 582 KRG 584


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