BLASTX nr result

ID: Coptis24_contig00034755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034755
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533351.1| conserved hypothetical protein [Ricinus comm...   158   5e-37
emb|CBI24760.3| unnamed protein product [Vitis vinifera]              154   6e-36
emb|CAN75811.1| hypothetical protein VITISV_004632 [Vitis vinifera]   154   6e-36
ref|XP_002310377.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_002533351.1| conserved hypothetical protein [Ricinus communis]
           gi|223526816|gb|EEF29036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 226

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/101 (73%), Positives = 81/101 (80%), Gaps = 3/101 (2%)
 Frame = -1

Query: 322 SYLSVDQHGIVAXXXXXXXXXLAQADWKSYNPPKNLNHREFRFWVSRSTGKCLTVFGGKT 143
           SYL+VD+HG V+         LA+ADWKS NPPK LNHREFRFWVS STGKCLTVFGGKT
Sbjct: 126 SYLTVDKHGKVSLRSLGSLESLAEADWKSVNPPKKLNHREFRFWVSHSTGKCLTVFGGKT 185

Query: 142 KK---QVGVSDCKFKGSNPYQLFAFRFHYHKAFCCCGRYNE 29
           KK    VGV++CKF GSNP+QLFAFRFHYHKAFCCCG  NE
Sbjct: 186 KKDKRSVGVAECKFDGSNPFQLFAFRFHYHKAFCCCGLSNE 226


>emb|CBI24760.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  154 bits (390), Expect = 6e-36
 Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
 Frame = -1

Query: 325 QSYLSVDQHGIVAXXXXXXXXXLAQADWKSYNPPKNLNHREFRFWVSRSTGKCLTVFGGK 146
           QSYL+ D+HG V+         LA+ADWKS NPPK LNHRE RFWV   TGKCLTVFGGK
Sbjct: 118 QSYLTADKHGKVSLRSLSSLKSLAEADWKSINPPKELNHRELRFWVHLGTGKCLTVFGGK 177

Query: 145 TKKQ-VGVSDCKFKGSNPYQLFAFRFHYHKAFCCCGRYNE 29
           TKK+ VGV+ CKF GSNPYQLFAFRFHYHKAFCCCG +NE
Sbjct: 178 TKKRTVGVAKCKFDGSNPYQLFAFRFHYHKAFCCCGVHNE 217


>emb|CAN75811.1| hypothetical protein VITISV_004632 [Vitis vinifera]
          Length = 231

 Score =  154 bits (390), Expect = 6e-36
 Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
 Frame = -1

Query: 325 QSYLSVDQHGIVAXXXXXXXXXLAQADWKSYNPPKNLNHREFRFWVSRSTGKCLTVFGGK 146
           QSYL+ D+HG V+         LA+ADWKS NPPK LNHRE RFWV   TGKCLTVFGGK
Sbjct: 132 QSYLTADKHGKVSLRSLSSLKSLAEADWKSINPPKELNHRELRFWVHLGTGKCLTVFGGK 191

Query: 145 TKKQ-VGVSDCKFKGSNPYQLFAFRFHYHKAFCCCGRYNE 29
           TKK+ VGV+ CKF GSNPYQLFAFRFHYHKAFCCCG +NE
Sbjct: 192 TKKRTVGVAKCKFDGSNPYQLFAFRFHYHKAFCCCGVHNE 231


>ref|XP_002310377.1| predicted protein [Populus trichocarpa] gi|222853280|gb|EEE90827.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/100 (67%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
 Frame = -1

Query: 325 QSYLSVDQHGIVAXXXXXXXXXLAQADWKSYNPPKNLNHREFRFWVSRSTGKCLTVF-GG 149
           QSYL+VD+ G V+         L +ADWKS NPPK LNHREFRFWV+R TGKCLTVF   
Sbjct: 117 QSYLTVDKKGKVSLRSLKSLQSLGEADWKSINPPKRLNHREFRFWVNRITGKCLTVFEEK 176

Query: 148 KTKKQVGVSDCKFKGSNPYQLFAFRFHYHKAFCCCGRYNE 29
           K K+ VGVS+CK  GSN YQLFAFRFHYHKAFC CG +NE
Sbjct: 177 KDKRTVGVSECKLDGSNTYQLFAFRFHYHKAFCSCGVHNE 216


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