BLASTX nr result

ID: Coptis24_contig00034720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034720
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF95881.1| putative pathogenesis-related protein 1 [Vitis h...   134   8e-30
ref|XP_002273546.1| PREDICTED: basic form of pathogenesis-relate...   134   1e-29
ref|XP_002273788.1| PREDICTED: basic form of pathogenesis-relate...   133   2e-29
gb|AAF78528.1|AF195237_1 pathogenesis-related protein [Pyrus pyr...   131   7e-29
gb|ACN52596.1| pathogenesis-related protein [Pyrus x bretschneid...   131   7e-29

>dbj|BAF95881.1| putative pathogenesis-related protein 1 [Vitis hybrid cultivar]
          Length = 160

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/104 (57%), Positives = 73/104 (70%)
 Frame = -2

Query: 314 MGLCTQEFVTLCLLGLVMVHVSVAQDSPQDFLSVHNSARAQVGVGPMTWDNNVAAFAADY 135
           MGLC      LC +GL + H+  AQ+SPQD+L+ HN+ARAQVGVGPM+WDN VAA+A +Y
Sbjct: 1   MGLCRSPLALLCFMGLALAHICCAQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNY 60

Query: 134 ANQMTGTCNLVHSSSSYGENLAGSTGDFSAIGAVNMWVSERQFY 3
           ANQ  G CNLVHS   YGENLA  +   +   AVNMWV E+  Y
Sbjct: 61  ANQRIGDCNLVHSGGPYGENLAWGSPSLTGTDAVNMWVGEKSNY 104


>ref|XP_002273546.1| PREDICTED: basic form of pathogenesis-related protein 1 [Vitis
           vinifera] gi|147811584|emb|CAN74267.1| hypothetical
           protein VITISV_000653 [Vitis vinifera]
           gi|297736373|emb|CBI25096.3| unnamed protein product
           [Vitis vinifera]
          Length = 161

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/105 (59%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
 Frame = -2

Query: 314 MGLCTQEFVTLCLLG-LVMVHVSVAQDSPQDFLSVHNSARAQVGVGPMTWDNNVAAFAAD 138
           MGLC +E   +C +G L +VH S AQ+S QD+L VHN+ARA VGV PMTWD+NVAA+A D
Sbjct: 1   MGLCKRELALICFIGILALVHPSHAQNSQQDYLDVHNAARADVGVEPMTWDDNVAAYARD 60

Query: 137 YANQMTGTCNLVHSSSSYGENLAGSTGDFSAIGAVNMWVSERQFY 3
           YA+Q +G CN+VHS+  YGENLA  +GDF+A  A N+WV E+  Y
Sbjct: 61  YASQRSGDCNMVHSNGPYGENLAMGSGDFTATDAANLWVGEKSNY 105


>ref|XP_002273788.1| PREDICTED: basic form of pathogenesis-related protein 1 [Vitis
           vinifera] gi|147795410|emb|CAN77102.1| hypothetical
           protein VITISV_021166 [Vitis vinifera]
           gi|297736377|emb|CBI25100.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/104 (56%), Positives = 73/104 (70%)
 Frame = -2

Query: 314 MGLCTQEFVTLCLLGLVMVHVSVAQDSPQDFLSVHNSARAQVGVGPMTWDNNVAAFAADY 135
           MGLC      LC +GL + H+  AQ+SPQD+L+ HN+ARAQVGVGPM+WDN VAA+A +Y
Sbjct: 1   MGLCRSPLALLCFMGLALAHICCAQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNY 60

Query: 134 ANQMTGTCNLVHSSSSYGENLAGSTGDFSAIGAVNMWVSERQFY 3
           ANQ  G CNLVHS   YGENLA  +   +   AVN+WV E+  Y
Sbjct: 61  ANQRIGDCNLVHSGGPYGENLAWGSPSLTGTDAVNLWVGEKSNY 104


>gb|AAF78528.1|AF195237_1 pathogenesis-related protein [Pyrus pyrifolia]
          Length = 142

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/104 (58%), Positives = 76/104 (73%)
 Frame = -2

Query: 314 MGLCTQEFVTLCLLGLVMVHVSVAQDSPQDFLSVHNSARAQVGVGPMTWDNNVAAFAADY 135
           MGLC      L +LG V++  S AQD+PQD+L+ HN+ARA VGVGP+TWD+NVA +A +Y
Sbjct: 1   MGLCNISLALLFILGSVLIQSSHAQDTPQDYLNSHNTARAAVGVGPLTWDDNVAGYAQNY 60

Query: 134 ANQMTGTCNLVHSSSSYGENLAGSTGDFSAIGAVNMWVSERQFY 3
           ANQ  G CNLVHS   YGENLA STGD S   AV++WV+E+  Y
Sbjct: 61  ANQHVGDCNLVHSGGPYGENLAMSTGDMSGTAAVDLWVAEKADY 104


>gb|ACN52596.1| pathogenesis-related protein [Pyrus x bretschneideri]
          Length = 132

 Score =  131 bits (329), Expect = 7e-29
 Identities = 61/104 (58%), Positives = 76/104 (73%)
 Frame = -2

Query: 314 MGLCTQEFVTLCLLGLVMVHVSVAQDSPQDFLSVHNSARAQVGVGPMTWDNNVAAFAADY 135
           MGLC      L +LG V++  S AQD+PQD+L+ HN+ARA VGVGP+TWD+NVA +A +Y
Sbjct: 1   MGLCNISLALLFILGSVLIQSSHAQDTPQDYLNSHNTARAAVGVGPLTWDDNVAGYAQNY 60

Query: 134 ANQMTGTCNLVHSSSSYGENLAGSTGDFSAIGAVNMWVSERQFY 3
           ANQ  G CNLVHS   YGENLA STGD S   AV++WV+E+  Y
Sbjct: 61  ANQHVGDCNLVHSGGPYGENLAMSTGDMSGTAAVDLWVAEKADY 104


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