BLASTX nr result

ID: Coptis24_contig00034690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034690
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324001.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
emb|CBI14908.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002337154.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_004161368.1| PREDICTED: uncharacterized LOC101204444 [Cuc...    75   7e-12
ref|XP_004138263.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    75   7e-12

>ref|XP_002324001.1| predicted protein [Populus trichocarpa] gi|222867003|gb|EEF04134.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/114 (38%), Positives = 71/114 (62%), Gaps = 5/114 (4%)
 Frame = +1

Query: 1   EKSFCTVANAMPW-SWCHPSMVSKSFNSHIVEEWHYRKESTLVVLDENAKVVTTNALQMV 177
           ++ F ++ N+MPW +  HPS++ K+    I E WH+R +  LVVLD   KVV+ NAL M+
Sbjct: 408 KEKFESLQNSMPWYTVYHPSLIDKAAIRFIREVWHFRNKPILVVLDPQGKVVSPNALHMM 467

Query: 178 ETWGASAFPFSREMEVSISKS*T--VERMIE--DFLILEQDWKSEIVCMYGGDN 327
             WG++AFPF+   E S+ +  T  +E +++  D +IL    + + + MYGGD+
Sbjct: 468 WIWGSNAFPFTSLREESLWREETWRLELLVDGIDPVILNWIKEEKYIFMYGGDD 521


>emb|CBI14908.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   EKSFCTVANAMPW-SWCHPSMVSKSFNSHIVEEWHYRKESTLVVLDENAKVVTTNALQMV 177
           +  F  +   MPW +  HPS++  +   +I E WH+ K++ LVVLD   KVV  NAL M+
Sbjct: 404 QNKFHELQKEMPWYTLLHPSLLEPAVVRYIKEVWHFTKKAILVVLDLQGKVVCRNALHMM 463

Query: 178 ETWGASAFPFSREMEVSISKS*T--VERMIEDFLILEQDW--KSEIVCMYGGDNPD 333
             WG +A+PF+   E S+ K  T  ++ +++D       W  + + +CMYGG N D
Sbjct: 464 WIWGNTAYPFTNSKEESLWKEETWRLKLLVDDIDATIFAWVNQGKYICMYGGVNSD 519


>ref|XP_002337154.1| predicted protein [Populus trichocarpa] gi|222838373|gb|EEE76738.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/116 (36%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
 Frame = +1

Query: 1   EKSFCTVANAMPW-SWCHPSMVSKSFNSHIVEEWHYRKESTLVVLDENAKVVTTNALQMV 177
           ++ F ++ ++MPW +  HPS++ K+    + E WH+R +  LVVLD   KVV+ NAL M+
Sbjct: 102 KEKFESMQSSMPWYTVYHPSLIEKAVIRFMKEVWHFRNKPILVVLDPQGKVVSPNALHMM 161

Query: 178 ETWGASAFPFSREMEVSISKS*T--VERMIE--DFLILEQDWKSEIVCMYGGDNPD 333
             WG+SAFPF+   E S+ +  T  +E +++  D +IL    + + + +YGGD+ +
Sbjct: 162 WIWGSSAFPFTSLREESLWRDETWRLELLVDGIDPVILNWIKEGKYIFLYGGDDDE 217


>ref|XP_004161368.1| PREDICTED: uncharacterized LOC101204444 [Cucumis sativus]
          Length = 698

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
 Frame = +1

Query: 31  MPW-SWCHPSMVSKSFNSHIVEEWHYRKESTLVVLDENAKVVTTNALQMVETWGASAFPF 207
           MPW S   PS++  S    I E+W++RK++ LV LD   KV +TNAL M+  WG  AFPF
Sbjct: 404 MPWFSVYDPSIIELSTIRFIKEKWNFRKKTILVALDPQGKVSSTNALHMIWIWGNLAFPF 463

Query: 208 S--REMEVSISKS*TVERMIE--DFLILEQDWKSEIVCMYGGDNPD 333
           +  RE E+  ++S  +E +I+  DF IL+   +   +C+YGG++ +
Sbjct: 464 TSEREEELWKTESWRLELLIDGIDFSILDWAAEGRYICIYGGEDTE 509


>ref|XP_004138263.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101204444 [Cucumis sativus]
          Length = 694

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 5/106 (4%)
 Frame = +1

Query: 31  MPW-SWCHPSMVSKSFNSHIVEEWHYRKESTLVVLDENAKVVTTNALQMVETWGASAFPF 207
           MPW S   PS++  S    I E+W++RK++ LV LD   KV +TNAL M+  WG  AFPF
Sbjct: 394 MPWFSVYDPSIIELSTIRFIKEKWNFRKKTILVALDPQGKVSSTNALHMIWIWGNLAFPF 453

Query: 208 S--REMEVSISKS*TVERMIE--DFLILEQDWKSEIVCMYGGDNPD 333
           +  RE E+  ++S  +E +I+  DF IL+   +   +C+YGG++ +
Sbjct: 454 TSEREEELWKTESWRLELLIDGIDFSILDWAAEGRYICIYGGEDTE 499


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