BLASTX nr result

ID: Coptis24_contig00034684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034684
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vini...   166   2e-39
emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]   166   2e-39
ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]   152   2e-35
ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35

>ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera]
           gi|297737034|emb|CBI26235.3| unnamed protein product
           [Vitis vinifera]
          Length = 674

 Score =  166 bits (419), Expect = 2e-39
 Identities = 70/107 (65%), Positives = 92/107 (85%)
 Frame = +3

Query: 3   TFSVGWFGERKKGKREVRVLCYYLDGTVNMYVRPLEGITVVVDADEMKITKYYDRHTVPM 182
           TF+VGWFGE +K +R +++LC+Y DGT N+Y+RP+EG+T+VVD DEMKIT+Y+DR TVPM
Sbjct: 161 TFTVGWFGE-EKSRRVLKILCFYTDGTANLYMRPIEGVTIVVDLDEMKITEYHDRLTVPM 219

Query: 183 PKIDGIEYRASKQKPPFGPSVEGAALVQPNGPGFEIDGHMIRWANWN 323
           P+ +G EYR SKQKPPFGP + G + +QP+GPGF+IDGH IRWANW+
Sbjct: 220 PEAEGTEYRLSKQKPPFGPRLNGVSSMQPDGPGFKIDGHNIRWANWD 266


>emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera]
          Length = 644

 Score =  166 bits (419), Expect = 2e-39
 Identities = 70/107 (65%), Positives = 92/107 (85%)
 Frame = +3

Query: 3   TFSVGWFGERKKGKREVRVLCYYLDGTVNMYVRPLEGITVVVDADEMKITKYYDRHTVPM 182
           TF+VGWFGE +K +R +++LC+Y DGT N+Y+RP+EG+T+VVD DEMKIT+Y+DR TVPM
Sbjct: 161 TFTVGWFGE-EKSRRVLKILCFYTDGTANLYMRPIEGVTIVVDLDEMKITEYHDRLTVPM 219

Query: 183 PKIDGIEYRASKQKPPFGPSVEGAALVQPNGPGFEIDGHMIRWANWN 323
           P+ +G EYR SKQKPPFGP + G + +QP+GPGF+IDGH IRWANW+
Sbjct: 220 PEAEGTEYRLSKQKPPFGPRLNGVSSMQPDGPGFKIDGHNIRWANWD 266


>ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score =  155 bits (393), Expect = 2e-36
 Identities = 67/107 (62%), Positives = 86/107 (80%)
 Frame = +3

Query: 3   TFSVGWFGERKKGKREVRVLCYYLDGTVNMYVRPLEGITVVVDADEMKITKYYDRHTVPM 182
           +F++GW+GE+++ KR VRVLC YLDGTVN+Y+RP+EGITV VD +EMKI  + DR TVPM
Sbjct: 155 SFAIGWYGEKRRNKRVVRVLCNYLDGTVNLYMRPIEGITVTVDLEEMKILGFKDRSTVPM 214

Query: 183 PKIDGIEYRASKQKPPFGPSVEGAALVQPNGPGFEIDGHMIRWANWN 323
           PK DG +YR S QKPPFG  ++G ++ Q +GP F IDGH IRWANW+
Sbjct: 215 PKADGTDYRESSQKPPFGSPLKGISMHQSDGPSFTIDGHAIRWANWD 261


>emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera]
          Length = 654

 Score =  152 bits (385), Expect = 2e-35
 Identities = 63/107 (58%), Positives = 86/107 (80%)
 Frame = +3

Query: 3   TFSVGWFGERKKGKREVRVLCYYLDGTVNMYVRPLEGITVVVDADEMKITKYYDRHTVPM 182
           TF+VGWFGE  K +R +++ C+Y DGT N+Y+RP+EG+T+VVD D+MKI +YYDR  VP+
Sbjct: 156 TFTVGWFGE-DKSRRVLKIPCFYTDGTANLYMRPIEGVTIVVDLDDMKIIEYYDRLMVPV 214

Query: 183 PKIDGIEYRASKQKPPFGPSVEGAALVQPNGPGFEIDGHMIRWANWN 323
           P+ +G EYR SKQ PPFGP + G + + P+GPGF+IDGH +RWANW+
Sbjct: 215 PEAEGTEYRLSKQNPPFGPPLNGVSAMPPDGPGFKIDGHNVRWANWD 261


>ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1|
           predicted protein [Populus trichocarpa]
          Length = 673

 Score =  151 bits (381), Expect = 6e-35
 Identities = 66/106 (62%), Positives = 83/106 (78%)
 Frame = +3

Query: 6   FSVGWFGERKKGKREVRVLCYYLDGTVNMYVRPLEGITVVVDADEMKITKYYDRHTVPMP 185
           F+VGW+GE ++ KR VRV+CYYLDGTVN Y+RP+EG+TV VD +E KI  + DR TVP+P
Sbjct: 159 FTVGWYGEERRKKRIVRVMCYYLDGTVNAYMRPVEGVTVTVDLEETKIIGFKDRLTVPIP 218

Query: 186 KIDGIEYRASKQKPPFGPSVEGAALVQPNGPGFEIDGHMIRWANWN 323
           K DG +YR SKQ PPF   ++G  +VQP+GP F IDGH IRWANW+
Sbjct: 219 KGDGTDYRGSKQNPPFLAQLKGITMVQPDGPSFTIDGHRIRWANWD 264


Top