BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034683
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   176   1e-42
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   176   1e-42
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   176   1e-42
ref|XP_003571303.1| PREDICTED: probable pre-mRNA-splicing factor...   175   3e-42
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]   175   4e-42

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/99 (85%), Positives = 93/99 (93%)
 Frame = +1

Query: 1   RLIVTSATLDAEKFSGYFSDCNIFTIPGRTYPVEILYAKQPESDYLDAALMTVLHIHLKK 180
           RLIVTSATLDAEKFSGYF +CNIFTIPGRT+PVEILY KQPESDYLDA+L+TVL IHL +
Sbjct: 666 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 725

Query: 181 PEGDILLFLTGQEEIDHACKTLFERMNGLGNNVPELIIL 297
           PEGDILLFLTGQEEIDHAC++L+ERM GLG NVPELIIL
Sbjct: 726 PEGDILLFLTGQEEIDHACQSLYERMKGLGKNVPELIIL 764


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/99 (85%), Positives = 93/99 (93%)
 Frame = +1

Query: 1   RLIVTSATLDAEKFSGYFSDCNIFTIPGRTYPVEILYAKQPESDYLDAALMTVLHIHLKK 180
           RLIVTSATLDAEKFSGYF +CNIFTIPGRT+PVEILY KQPESDYLDA+L+TVL IHL +
Sbjct: 669 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 728

Query: 181 PEGDILLFLTGQEEIDHACKTLFERMNGLGNNVPELIIL 297
           PEGDILLFLTGQEEIDHAC++L+ERM GLG NVPELIIL
Sbjct: 729 PEGDILLFLTGQEEIDHACQSLYERMKGLGKNVPELIIL 767


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/99 (85%), Positives = 93/99 (93%)
 Frame = +1

Query: 1   RLIVTSATLDAEKFSGYFSDCNIFTIPGRTYPVEILYAKQPESDYLDAALMTVLHIHLKK 180
           RLIVTSATLDAEKFSGYF +CNIFTIPGRT+PVEILY KQPESDYLDA+L+TVL IHL +
Sbjct: 678 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 737

Query: 181 PEGDILLFLTGQEEIDHACKTLFERMNGLGNNVPELIIL 297
           PEGDILLFLTGQEEIDHAC++L+ERM GLG NVPELIIL
Sbjct: 738 PEGDILLFLTGQEEIDHACQSLYERMKGLGKNVPELIIL 776


>ref|XP_003571303.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Brachypodium distachyon]
          Length = 1249

 Score =  175 bits (444), Expect = 3e-42
 Identities = 85/99 (85%), Positives = 92/99 (92%)
 Frame = +1

Query: 1    RLIVTSATLDAEKFSGYFSDCNIFTIPGRTYPVEILYAKQPESDYLDAALMTVLHIHLKK 180
            RLIVTSATLDAEKFSGYF +CNIFTIPGRTYPVEILY KQPESDYLDAAL+TVL IHL +
Sbjct: 743  RLIVTSATLDAEKFSGYFFNCNIFTIPGRTYPVEILYTKQPESDYLDAALITVLQIHLTE 802

Query: 181  PEGDILLFLTGQEEIDHACKTLFERMNGLGNNVPELIIL 297
            PEGDIL+FLTGQEEIDHAC+ L+ERM GLG +VPELIIL
Sbjct: 803  PEGDILVFLTGQEEIDHACQCLYERMKGLGKDVPELIIL 841


>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
          Length = 1240

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/99 (85%), Positives = 92/99 (92%)
 Frame = +1

Query: 1    RLIVTSATLDAEKFSGYFSDCNIFTIPGRTYPVEILYAKQPESDYLDAALMTVLHIHLKK 180
            RLIVTSATLDAEKFSGYF +CNIFTIPGRT+PVEILY KQPESDYLDAAL+TVL IHL +
Sbjct: 734  RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTE 793

Query: 181  PEGDILLFLTGQEEIDHACKTLFERMNGLGNNVPELIIL 297
            PEGDILLFLTGQEEIDHAC+ L+ERM GLG +VPELIIL
Sbjct: 794  PEGDILLFLTGQEEIDHACQCLYERMKGLGKDVPELIIL 832