BLASTX nr result

ID: Coptis24_contig00034651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034651
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   214   1e-53
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              211   9e-53
ref|XP_004153596.1| PREDICTED: uncharacterized protein LOC101220...   201   1e-49
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   189   4e-46
ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l...   187   1e-45

>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  214 bits (545), Expect = 1e-53
 Identities = 113/209 (54%), Positives = 148/209 (70%)
 Frame = -1

Query: 627 LKSLVQTVSEIPVSALEFYDNLGSYTRLTDLCYKILSGVLRPEHGNETDTAVQVLKALTP 448
           LKSLVQTV+EIP  ALE   N  S+ +LT LC ++L+ VL  EHG++  TA +VLK+L+P
Sbjct: 204 LKSLVQTVAEIPAMALELCGNTASFDKLTHLCSRVLTEVLSSEHGDQATTAAEVLKSLSP 263

Query: 447 SILLFKSQARTCALRFVREHMIVVAKGNAAVRKAIVYLPRYLVXXXXXXXXXXXXXXXSI 268
            ILL KS+ART AL F+   M+ +AK    V+KAIV LPRYL+               S+
Sbjct: 264 LILLAKSEARTFALGFMMNRMMGMAKEFDGVKKAIVNLPRYLLQKAPEKSEPRALAVESV 323

Query: 267 MEVVRAMELEDQIGFVEYVIKLSQGKANLRLLAVDLIPMLLMALPDPLGLNAEDEGKDWW 88
           ME+V+ ME E+QIGFV YV+K++QGK++ RLLAVDL P+L+M+L DPLG+N  +E K+ W
Sbjct: 324 MEIVKTMEFEEQIGFVMYVVKMTQGKSHFRLLAVDLFPLLIMSLRDPLGVNTGNEVKNSW 383

Query: 87  GLRCLEVLINRCSDLNAASRAKALSNVAQ 1
           GL CLE LI RCSD  A  RA+AL+N+AQ
Sbjct: 384 GLNCLEALIQRCSDATAGIRARALTNLAQ 412


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  211 bits (537), Expect = 9e-53
 Identities = 111/208 (53%), Positives = 147/208 (70%)
 Frame = -1

Query: 624 KSLVQTVSEIPVSALEFYDNLGSYTRLTDLCYKILSGVLRPEHGNETDTAVQVLKALTPS 445
           +SLVQTV+EIP  ALE   N  S+ +LT LC ++L+ VL  EHG++  TA +VLK+L+P 
Sbjct: 164 ESLVQTVAEIPAMALELCGNTASFDKLTHLCSRVLTEVLSSEHGDQATTAAEVLKSLSPL 223

Query: 444 ILLFKSQARTCALRFVREHMIVVAKGNAAVRKAIVYLPRYLVXXXXXXXXXXXXXXXSIM 265
           ILL KS+ART AL F+   M+ +AK    V+KAIV LPRYL+               S+M
Sbjct: 224 ILLAKSEARTFALGFMMNRMMGMAKEFDGVKKAIVNLPRYLLQKAPEKSEPRALAVESVM 283

Query: 264 EVVRAMELEDQIGFVEYVIKLSQGKANLRLLAVDLIPMLLMALPDPLGLNAEDEGKDWWG 85
           E+V+ ME E+QIGFV YV+K++QGK++ RLLAVDL P+L+M+L DPLG+N  +E K+ WG
Sbjct: 284 EIVKTMEFEEQIGFVMYVVKMTQGKSHFRLLAVDLFPLLIMSLRDPLGVNTGNEVKNSWG 343

Query: 84  LRCLEVLINRCSDLNAASRAKALSNVAQ 1
           L CLE LI RCSD  A  RA+AL+N+AQ
Sbjct: 344 LNCLEALIQRCSDATAGIRARALTNLAQ 371


>ref|XP_004153596.1| PREDICTED: uncharacterized protein LOC101220407, partial [Cucumis
           sativus]
          Length = 500

 Score =  201 bits (510), Expect = 1e-49
 Identities = 109/208 (52%), Positives = 146/208 (70%)
 Frame = -1

Query: 627 LKSLVQTVSEIPVSALEFYDNLGSYTRLTDLCYKILSGVLRPEHGNETDTAVQVLKALTP 448
           LKSL++TV +IPV ALE   NL  Y++ TD C +ILS +LRPE G+ ++TAV+V+K+L+P
Sbjct: 203 LKSLIETVIDIPVLALEICTNLSIYSKFTDFCSRILSAMLRPEDGDLSNTAVEVIKSLSP 262

Query: 447 SILLFKSQARTCALRFVREHMIVVAKGNAAVRKAIVYLPRYLVXXXXXXXXXXXXXXXSI 268
            IL  K QAR  AL FV   +  VAK +  V+ A+V LPRYLV               SI
Sbjct: 263 LILNHKDQARAFALEFVTIQIGKVAKESDGVKSALVNLPRYLVQKAPEKSEPRSLAVDSI 322

Query: 267 MEVVRAMELEDQIGFVEYVIKLSQGKANLRLLAVDLIPMLLMALPDPLGLNAEDEGKDWW 88
           MEVV+A+EL DQIGFV+Y +K++QGK+NLRLLAVDLI ML+M+L DP+ ++++ E KD W
Sbjct: 323 MEVVKALELPDQIGFVDYAVKMTQGKSNLRLLAVDLISMLIMSLSDPMVIDSKIELKDSW 382

Query: 87  GLRCLEVLINRCSDLNAASRAKALSNVA 4
              CL  L+ RCSD +A  RA+AL+N+A
Sbjct: 383 VFGCLVALVQRCSDASAPIRARALTNLA 410


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
           condensin, putative [Ricinus communis]
          Length = 1313

 Score =  189 bits (480), Expect = 4e-46
 Identities = 105/209 (50%), Positives = 137/209 (65%)
 Frame = -1

Query: 627 LKSLVQTVSEIPVSALEFYDNLGSYTRLTDLCYKILSGVLRPEHGNETDTAVQVLKALTP 448
           LKSL+ TV EIPV A+E    + ++ RL D C  IL  VL+ EHG E +TA +VLK+LTP
Sbjct: 178 LKSLIHTVVEIPVLAIEM--GVVNFNRLADFCSIILRQVLKSEHGKEGETAAEVLKSLTP 235

Query: 447 SILLFKSQARTCALRFVREHMIVVAKGNAAVRKAIVYLPRYLVXXXXXXXXXXXXXXXSI 268
            IL  KSQAR+ AL FV++ +      N  V+KA+  LPRYL+               +I
Sbjct: 236 LILSGKSQARSFALGFVKDSVTCSDNENERVKKAVFNLPRYLIKKAPEKAEGRGLAVEAI 295

Query: 267 MEVVRAMELEDQIGFVEYVIKLSQGKANLRLLAVDLIPMLLMALPDPLGLNAEDEGKDWW 88
           ME+V +M  +DQ+GFV+YV++++QGK NLRLL VDLI  L+M L DP G++   E KD W
Sbjct: 296 MEIVGSMTSDDQVGFVKYVVRITQGKTNLRLLGVDLILNLMMMLKDPFGVDLGYEVKDSW 355

Query: 87  GLRCLEVLINRCSDLNAASRAKALSNVAQ 1
           G  CLE LI RCSD +A  RA+ALSN+AQ
Sbjct: 356 GFDCLEALIQRCSDSSAGIRARALSNLAQ 384


>ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1315

 Score =  187 bits (475), Expect = 1e-45
 Identities = 99/210 (47%), Positives = 144/210 (68%), Gaps = 1/210 (0%)
 Frame = -1

Query: 627 LKSLVQTVSEIPVSALEFYDNLGSYTRLTDLCYKILSGVLRPEHGNETDTAVQVLKALTP 448
           LKSLVQTVSEIP+ ALE Y    +Y RL +LC KIL GVL  +HG+   TA ++ K+LTP
Sbjct: 184 LKSLVQTVSEIPLLALE-YSGFLNYERLMELCGKILGGVLNSDHGDMALTAAEISKSLTP 242

Query: 447 SILLFKSQARTCALRFVREHMIVVAKGNAAVRKAIVYLPRYLVXXXXXXXXXXXXXXXSI 268
            +L+ K Q R+ AL FV   ++ +AK N  ++K +  LP++LV               ++
Sbjct: 243 LLLMGKHQGRSFALGFVSRKLMGLAKDNCELKKVVSNLPKFLVHKAPEKAEPRGFAVEAV 302

Query: 267 MEVVRAMELEDQIGFVEYVIKLSQGKANLRLLAVDLIPMLLMALPDPLGLNAEDEG-KDW 91
           +++V+AME+EDQ  FV++V+K+ QGK+N R+LAVDLIP+L+  L +PLG+ + + G K+ 
Sbjct: 303 LDIVKAMEVEDQSNFVDFVMKMCQGKSNFRILAVDLIPLLISLLGNPLGVISSENGLKES 362

Query: 90  WGLRCLEVLINRCSDLNAASRAKALSNVAQ 1
           WG+ CL+ L+ RCSD +A  RA+ALSN+AQ
Sbjct: 363 WGVGCLDALLQRCSDTSALIRARALSNLAQ 392


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