BLASTX nr result

ID: Coptis24_contig00034410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034410
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transpor...   115   5e-24
emb|CBI34989.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_004147481.1| PREDICTED: probable peptide/nitrate transpor...   113   1e-23
ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transporter At5g14940-like
           [Vitis vinifera]
          Length = 533

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/77 (74%), Positives = 68/77 (88%)
 Frame = +1

Query: 109 VFCVVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLLGAFLADS 288
           +  +VVAG+ERFAFKGV SNLVTYLT+VVKMSNS+AAKTVNSWCG++ +L LL A LADS
Sbjct: 15  ILLIVVAGMERFAFKGVVSNLVTYLTDVVKMSNSTAAKTVNSWCGLTSMLALLVAPLADS 74

Query: 289 FLDRYSTILASSFLYVV 339
           +  RYSTILASSFLY++
Sbjct: 75  YWYRYSTILASSFLYII 91


>emb|CBI34989.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/77 (74%), Positives = 68/77 (88%)
 Frame = +1

Query: 109 VFCVVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLLGAFLADS 288
           +  +VVAG+ERFAFKGV SNLVTYLT+VVKMSNS+AAKTVNSWCG++ +L LL A LADS
Sbjct: 15  ILLIVVAGMERFAFKGVVSNLVTYLTDVVKMSNSTAAKTVNSWCGLTSMLALLVAPLADS 74

Query: 289 FLDRYSTILASSFLYVV 339
           +  RYSTILASSFLY++
Sbjct: 75  YWYRYSTILASSFLYII 91


>ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|222874578|gb|EEF11709.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/74 (78%), Positives = 68/74 (91%)
 Frame = +1

Query: 118 VVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLLGAFLADSFLD 297
           +V+AG+ERFAFKGVASNLVTYLT+VVKMSNS+AAKTVN+WCG + +LPLL A LADS+ D
Sbjct: 18  IVIAGMERFAFKGVASNLVTYLTDVVKMSNSAAAKTVNNWCGFTSMLPLLVASLADSW-D 76

Query: 298 RYSTILASSFLYVV 339
           RYSTIL SSF+YVV
Sbjct: 77  RYSTILTSSFIYVV 90


>ref|XP_004147481.1| PREDICTED: probable peptide/nitrate transporter At5g14940-like
           [Cucumis sativus]
          Length = 560

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/77 (71%), Positives = 68/77 (88%)
 Frame = +1

Query: 109 VFCVVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLLGAFLADS 288
           +  +VV+G+ERF FKGVASNLVTYLT+V+KMSNSSAAKTV+SWCG + +LPL+ A LADS
Sbjct: 24  ILLIVVSGMERFVFKGVASNLVTYLTDVMKMSNSSAAKTVSSWCGFTSMLPLVVAPLADS 83

Query: 289 FLDRYSTILASSFLYVV 339
           + DRYSTIL S+FLYV+
Sbjct: 84  YWDRYSTILGSAFLYVL 100


>ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|222847991|gb|EEE85538.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  113 bits (283), Expect = 1e-23
 Identities = 58/74 (78%), Positives = 68/74 (91%)
 Frame = +1

Query: 118 VVVAGVERFAFKGVASNLVTYLTEVVKMSNSSAAKTVNSWCGVSFLLPLLGAFLADSFLD 297
           +V+AG+ERFAFKGVASNLVTYLT+VV MSNS+AAKTVN+WCG + +LPLL A LADS+ D
Sbjct: 18  IVIAGMERFAFKGVASNLVTYLTDVVMMSNSAAAKTVNNWCGFTSMLPLLVASLADSW-D 76

Query: 298 RYSTILASSFLYVV 339
           RYSTIL+SSFLYVV
Sbjct: 77  RYSTILSSSFLYVV 90


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