BLASTX nr result

ID: Coptis24_contig00034371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034371
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   166   3e-39
emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]   165   5e-39
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   161   7e-38
ref|XP_002264364.2| PREDICTED: putative disease resistance RPP13...   159   3e-37
emb|CAN69685.1| hypothetical protein VITISV_039904 [Vitis vinifera]   159   3e-37

>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1093

 Score =  166 bits (419), Expect = 3e-39
 Identities = 79/177 (44%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
 Frame = -2

Query: 527 KMDDIQKKVDEIAREMEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRENDKTKLT 348
           K+ +I +++DEIA+E + L + +  G++ I+T++R  + +  + DE+ VFGR+ DK ++ 
Sbjct: 119 KIKEINERLDEIAKERDELGLREGAGATWIETRDRERLQTSSLIDESCVFGRKEDKKEIV 178

Query: 347 NVLLSDSL--ENVNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRRI 174
           N+L+SD     +V V+ +VGM G+GKTTL QLV+ND  ++ HF L+MWV V++DF+ +R+
Sbjct: 179 NLLVSDDYCGNDVGVLPIVGMGGLGKTTLAQLVFNDETVARHFDLKMWVCVSDDFNAQRL 238

Query: 173 TKSIIESATHNVIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWNILQAPLR 3
           TKSI+ES      DLMDL+ LQ +L+  L  K+F LVLDDVW+E  +DW++++ P R
Sbjct: 239 TKSILESVERKSCDLMDLNILQTSLQDRLRGKRFLLVLDDVWHEKKSDWDVVRLPFR 295


>emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]
          Length = 951

 Score =  165 bits (417), Expect = 5e-39
 Identities = 86/179 (48%), Positives = 123/179 (68%), Gaps = 4/179 (2%)
 Frame = -2

Query: 527 KMDDIQKKVDEIAREMEYLYMSKLVGSS--QIKTKERPPIGSLLMEDENGVFGRENDKTK 354
           K++ I  ++DEIA++ + L + +  G      +   RPP  SL+  DE+ VFGRE +K +
Sbjct: 112 KLEKINMRLDEIAKKGDELGLKERSGEKGHNARPNARPPSSSLV--DESSVFGREVEKEE 169

Query: 353 LTNVLLSDSL--ENVNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVR 180
           +  +L+SD     +V V+ +VGM G+GKTTL QLVYND  +++HF+L+MWV V++DFDVR
Sbjct: 170 ILELLVSDEYGGSDVCVIPIVGMGGLGKTTLAQLVYNDEKVTKHFELKMWVCVSDDFDVR 229

Query: 179 RITKSIIESATHNVIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWNILQAPLR 3
           R TKS+++SAT    DLMDLD LQ  LR +L  K++ LVLDDVW E  +DW+ L+ PLR
Sbjct: 230 RATKSVLDSATGKNFDLMDLDILQSKLRDILKGKRYLLVLDDVWTEKKSDWDRLRLPLR 288


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score =  161 bits (407), Expect = 7e-38
 Identities = 83/177 (46%), Positives = 123/177 (69%), Gaps = 2/177 (1%)
 Frame = -2

Query: 527 KMDDIQKKVDEIAREMEYLYMSKLVGSSQIKTKERPPIGSLLMEDENGVFGRENDKTKLT 348
           K++ I +++DEI +E + L + ++ G    +  +RP   SL+  +E+ V GRE +K ++ 
Sbjct: 112 KLEKINERLDEIEKERDGLGLREISGEK--RNNKRPQSSSLV--EESRVLGREVEKEEIV 167

Query: 347 NVLLSDSL--ENVNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRRI 174
            +L+SD     +V V+ +VGM G+GKTTL QLVYND  +++HF+L+MWV V++DFDVRR 
Sbjct: 168 ELLVSDEYGGSDVCVIPIVGMGGLGKTTLAQLVYNDEKVTKHFELKMWVCVSDDFDVRRA 227

Query: 173 TKSIIESATHNVIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWNILQAPLR 3
           TKS+++SAT    DLMDLD LQ  LR +L  K++ LVLDDVW E  +DW+ L+ PLR
Sbjct: 228 TKSVLDSATGKNFDLMDLDILQSKLRDILKGKRYLLVLDDVWTEKKSDWDRLRLPLR 284


>ref|XP_002264364.2| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1310

 Score =  159 bits (401), Expect = 3e-37
 Identities = 85/178 (47%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
 Frame = -2

Query: 527 KMDDIQKKVDEIAREMEYLYMSK-LVGSSQIKTKERPPIGSLLMEDENGVFGRENDKTKL 351
           K+  I  ++ EI+ +   L++ + + G S  KT+E  P  SL+  DE+ V+GRE DK  +
Sbjct: 137 KIKKITARLQEISAQKNDLHLRENIAGESSTKTREILPTTSLV--DESRVYGRETDKAAI 194

Query: 350 TNVLLSDS--LENVNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRR 177
            N+LL D    + V V+ VVGMAGIGKTTL QL +ND  I  HF LR+WV V++DFDV +
Sbjct: 195 ANLLLRDDPCTDEVCVIPVVGMAGIGKTTLAQLAFNDDEIKAHFDLRVWVYVSDDFDVLK 254

Query: 176 ITKSIIESATHNVIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWNILQAPLR 3
           ITK+I++S + N  D+ DL+ LQ+TLR  L+ KKF L+LDDVWNE+++ W+ L  P+R
Sbjct: 255 ITKTILQSVSPNTQDVNDLNLLQMTLREGLSGKKFLLILDDVWNENFDSWDFLCMPMR 312


>emb|CAN69685.1| hypothetical protein VITISV_039904 [Vitis vinifera]
          Length = 2277

 Score =  159 bits (401), Expect = 3e-37
 Identities = 85/178 (47%), Positives = 121/178 (67%), Gaps = 3/178 (1%)
 Frame = -2

Query: 527  KMDDIQKKVDEIAREMEYLYMSK-LVGSSQIKTKERPPIGSLLMEDENGVFGRENDKTKL 351
            K+  I  ++ EI+ +   L++ + + G S  KT+E  P  SL+  DE+ V+GRE DK  +
Sbjct: 1066 KIKKITARLQEISAQKNDLHLRENIAGESSTKTREILPTTSLV--DESRVYGRETDKAAI 1123

Query: 350  TNVLLSDS--LENVNVVSVVGMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVRR 177
             N+LL D    + V V+ VVGMAGIGKTTL QL +ND  I  HF LR+WV V++DFDV +
Sbjct: 1124 ANLLLRDDPCTDEVCVIPVVGMAGIGKTTLAQLAFNDDEIKAHFDLRVWVYVSDDFDVLK 1183

Query: 176  ITKSIIESATHNVIDLMDLDPLQVTLRSLLAKKKFFLVLDDVWNESYNDWNILQAPLR 3
            ITK+I++S + N  D+ DL+ LQ+TLR  L+ KKF L+LDDVWNE+++ W+ L  P+R
Sbjct: 1184 ITKTILQSVSPNTQDVNDLNLLQMTLREGLSGKKFLLILDDVWNENFDSWDFLCMPMR 1241


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