BLASTX nr result

ID: Coptis24_contig00034369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034369
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261...    85   7e-15
emb|CBI21012.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454...    83   2e-14
ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14

>ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|222855587|gb|EEE93134.1|
           predicted protein [Populus trichocarpa]
          Length = 847

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
 Frame = +3

Query: 27  GSVRLSG--SLCWRTSPITPRPQLSGSKLCHESDSDIG-YEILEDDTPDILKDTHTPIKA 197
           GS RLS   SL W +SPITP  +L  +K     DSD G Y+ILEDDTP+ILKD+  PI +
Sbjct: 727 GSARLSSGSSLHWYSSPITPMTRLGETKN-QAQDSDCGLYDILEDDTPEILKDSSAPITS 785

Query: 198 VKASSPNQKRVSPPNTHL 251
           VKASSPN+KRVSPP++H+
Sbjct: 786 VKASSPNKKRVSPPHSHI 803


>ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera]
          Length = 1001

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/72 (62%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = +3

Query: 45   GSLCWRTSPITPRPQLSGSKLCH--ESDSDIGYEILEDDTPDILKDTHTPIKAVKASSPN 218
            GSL WR+SPI P  QL  +K+    ESD+++ Y+ILEDDTP ILKD  TP KAVKASSP 
Sbjct: 879  GSLRWRSSPIPPSTQLGETKIFQGLESDNEL-YDILEDDTPTILKDASTPTKAVKASSPK 937

Query: 219  QKRVSPPNTHLH 254
            QKRVSPP    H
Sbjct: 938  QKRVSPPKIQSH 949


>emb|CBI21012.3| unnamed protein product [Vitis vinifera]
          Length = 1094

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/72 (62%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = +3

Query: 45   GSLCWRTSPITPRPQLSGSKLCH--ESDSDIGYEILEDDTPDILKDTHTPIKAVKASSPN 218
            GSL WR+SPI P  QL  +K+    ESD+++ Y+ILEDDTP ILKD  TP KAVKASSP 
Sbjct: 866  GSLRWRSSPIPPSTQLGETKIFQGLESDNEL-YDILEDDTPTILKDASTPTKAVKASSPK 924

Query: 219  QKRVSPPNTHLH 254
            QKRVSPP    H
Sbjct: 925  QKRVSPPKIQSH 936


>ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1,
            putative [Ricinus communis]
          Length = 873

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
 Frame = +3

Query: 27   GSVRLSG--SLCWRTSPITPRPQLSGSKLC-HESDSDIGYEILEDDTPDILKDTHTPIKA 197
            GS RL    S+ W  SPITP  +L  +K+  H+SDS + Y ILEDDTP+ILK+  TP  +
Sbjct: 753  GSGRLPSGRSVRWWNSPITPMTRLGENKIQGHDSDSGL-YNILEDDTPEILKEGSTPSAS 811

Query: 198  VKASSPNQKRVSPPNTHLHXXXXXXXXXXXXXXKFVLQ 311
            VKASSPN+KRVSPP  H+H              KF+L+
Sbjct: 812  VKASSPNKKRVSPPQNHIHDFRSSSSGGLKSGRKFILR 849


>ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|222866282|gb|EEF03413.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
 Frame = +3

Query: 6   VSQVQLQ-GSVRLS--GSLCWRTSPITPRPQLSGSKLCHESDSDIG-YEILEDDTPDILK 173
           +SQV L  GS RLS  GSL WR+SPITP  +L  +K     DS  G Y+ILED TP+I K
Sbjct: 14  ISQVCLYPGSGRLSSSGSLQWRSSPITPMTRLGETKT-QALDSGCGLYDILEDGTPEIFK 72

Query: 174 DTHTPIKAVKASSPNQKRVSPPNTHLHXXXXXXXXXXXXXXKFVLQ 311
           ++ TP+ +VKASSP++KRVSPP  H+               KFVL+
Sbjct: 73  ESPTPVTSVKASSPHKKRVSPPRGHIQEFQSSSSAGLKSGRKFVLK 118


Top