BLASTX nr result
ID: Coptis24_contig00034369
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034369 (312 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|2... 85 5e-15 ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261... 85 7e-15 emb|CBI21012.3| unnamed protein product [Vitis vinifera] 85 7e-15 ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|2235454... 83 2e-14 ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|2... 82 4e-14 >ref|XP_002309611.1| predicted protein [Populus trichocarpa] gi|222855587|gb|EEE93134.1| predicted protein [Populus trichocarpa] Length = 847 Score = 85.1 bits (209), Expect = 5e-15 Identities = 47/78 (60%), Positives = 58/78 (74%), Gaps = 3/78 (3%) Frame = +3 Query: 27 GSVRLSG--SLCWRTSPITPRPQLSGSKLCHESDSDIG-YEILEDDTPDILKDTHTPIKA 197 GS RLS SL W +SPITP +L +K DSD G Y+ILEDDTP+ILKD+ PI + Sbjct: 727 GSARLSSGSSLHWYSSPITPMTRLGETKN-QAQDSDCGLYDILEDDTPEILKDSSAPITS 785 Query: 198 VKASSPNQKRVSPPNTHL 251 VKASSPN+KRVSPP++H+ Sbjct: 786 VKASSPNKKRVSPPHSHI 803 >ref|XP_002282493.2| PREDICTED: uncharacterized protein LOC100261127 [Vitis vinifera] Length = 1001 Score = 84.7 bits (208), Expect = 7e-15 Identities = 45/72 (62%), Positives = 52/72 (72%), Gaps = 2/72 (2%) Frame = +3 Query: 45 GSLCWRTSPITPRPQLSGSKLCH--ESDSDIGYEILEDDTPDILKDTHTPIKAVKASSPN 218 GSL WR+SPI P QL +K+ ESD+++ Y+ILEDDTP ILKD TP KAVKASSP Sbjct: 879 GSLRWRSSPIPPSTQLGETKIFQGLESDNEL-YDILEDDTPTILKDASTPTKAVKASSPK 937 Query: 219 QKRVSPPNTHLH 254 QKRVSPP H Sbjct: 938 QKRVSPPKIQSH 949 >emb|CBI21012.3| unnamed protein product [Vitis vinifera] Length = 1094 Score = 84.7 bits (208), Expect = 7e-15 Identities = 45/72 (62%), Positives = 52/72 (72%), Gaps = 2/72 (2%) Frame = +3 Query: 45 GSLCWRTSPITPRPQLSGSKLCH--ESDSDIGYEILEDDTPDILKDTHTPIKAVKASSPN 218 GSL WR+SPI P QL +K+ ESD+++ Y+ILEDDTP ILKD TP KAVKASSP Sbjct: 866 GSLRWRSSPIPPSTQLGETKIFQGLESDNEL-YDILEDDTPTILKDASTPTKAVKASSPK 924 Query: 219 QKRVSPPNTHLH 254 QKRVSPP H Sbjct: 925 QKRVSPPKIQSH 936 >ref|XP_002515547.1| tso1, putative [Ricinus communis] gi|223545491|gb|EEF46996.1| tso1, putative [Ricinus communis] Length = 873 Score = 83.2 bits (204), Expect = 2e-14 Identities = 48/98 (48%), Positives = 61/98 (62%), Gaps = 3/98 (3%) Frame = +3 Query: 27 GSVRLSG--SLCWRTSPITPRPQLSGSKLC-HESDSDIGYEILEDDTPDILKDTHTPIKA 197 GS RL S+ W SPITP +L +K+ H+SDS + Y ILEDDTP+ILK+ TP + Sbjct: 753 GSGRLPSGRSVRWWNSPITPMTRLGENKIQGHDSDSGL-YNILEDDTPEILKEGSTPSAS 811 Query: 198 VKASSPNQKRVSPPNTHLHXXXXXXXXXXXXXXKFVLQ 311 VKASSPN+KRVSPP H+H KF+L+ Sbjct: 812 VKASSPNKKRVSPPQNHIHDFRSSSSGGLKSGRKFILR 849 >ref|XP_002324848.1| predicted protein [Populus trichocarpa] gi|222866282|gb|EEF03413.1| predicted protein [Populus trichocarpa] Length = 140 Score = 82.0 bits (201), Expect = 4e-14 Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 4/106 (3%) Frame = +3 Query: 6 VSQVQLQ-GSVRLS--GSLCWRTSPITPRPQLSGSKLCHESDSDIG-YEILEDDTPDILK 173 +SQV L GS RLS GSL WR+SPITP +L +K DS G Y+ILED TP+I K Sbjct: 14 ISQVCLYPGSGRLSSSGSLQWRSSPITPMTRLGETKT-QALDSGCGLYDILEDGTPEIFK 72 Query: 174 DTHTPIKAVKASSPNQKRVSPPNTHLHXXXXXXXXXXXXXXKFVLQ 311 ++ TP+ +VKASSP++KRVSPP H+ KFVL+ Sbjct: 73 ESPTPVTSVKASSPHKKRVSPPRGHIQEFQSSSSAGLKSGRKFVLK 118