BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034341
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatul...    64   2e-08
ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    63   3e-08
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               61   8e-08
gb|EEE68045.1| hypothetical protein OsJ_26042 [Oryza sativa Japo...    61   8e-08

>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = +3

Query: 141 DRVSTLPEELLGHILSFLDMKHSVQTCILSKSWRFGWRSVTSLNFDMNLWK 293
           D +S LP  ++GHILSFL  K ++ TCILSKSWR  WRS+++ +FD   WK
Sbjct: 16  DMISDLPNVIIGHILSFLPTKDALCTCILSKSWRELWRSLSNFDFDDRTWK 66


>ref|XP_003627116.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355521138|gb|AET01592.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 425

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
 Frame = +3

Query: 108 HPEKMTATGDADRVSTLPEELLGHILSFLDMKHSVQTCILSKSWRFGWRSVTSLNFDMNL 287
           H     ATG  DR+  +P+ L+ HILSF++ + +++TC+LSK WR+ W+S+  L F+   
Sbjct: 25  HVYNCVATGHQDRLGDMPDCLIHHILSFMETRDAIRTCVLSKRWRYIWKSIPCLYFNSKS 84

Query: 288 WKEFFDFS---LW 317
           +    DF    LW
Sbjct: 85  FTRLVDFKKFVLW 97


>ref|XP_003531612.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
           [Glycine max]
          Length = 450

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = +3

Query: 141 DRVSTLPEELLGHILSFLDMKHSVQTCILSKSWRFGWRSVTSLNFDMNLWKEFFDFS--- 311
           DR+S +P+ ++ HILSF++ K ++QTC+LSK WR+ W SV  LNF    +    DF    
Sbjct: 56  DRLSDMPDCIIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLNFSSKSFMRLVDFKKFV 115

Query: 312 LW 317
           LW
Sbjct: 116 LW 117


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = +3

Query: 141 DRVSTLPEELLGHILSFLDMKHSVQTCILSKSWRFGWRSVTSLNFDMNLW 290
           D +S LP+ELL HILSFL  K +V T ILSK WR+ W SV  L+FD  LW
Sbjct: 10  DIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELW 59


>gb|EEE68045.1| hypothetical protein OsJ_26042 [Oryza sativa Japonica Group]
          Length = 245

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
 Frame = +3

Query: 129 TGDADRVSTLPEELLGHILSFLDMKHSVQTCILSKSWRFGWRSVTSLNFD------MNLW 290
           T   DR+S LP+ELL H+++FL  K +VQTC+LS+ W+  W SV  LN D      +  +
Sbjct: 8   TSVCDRISALPDELLHHVMTFLTAKEAVQTCVLSRRWQNVWASVGYLNVDSCNFITVKHF 67

Query: 291 KEFFDFSLWPYPEYLRQSKGSIQLFC 368
           K+F D  L      L++S   + +FC
Sbjct: 68  KKFVDNLL------LQRSCALLDMFC 87