BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034284
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223...   203   1e-50
gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]                       196   1e-48
ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera] gi|2...   196   1e-48
ref|XP_004135474.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]     190   9e-47
ref|XP_004155401.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]     190   9e-47

>ref|XP_002531409.1| cyclin d, putative [Ricinus communis] gi|223529002|gb|EEF30993.1|
           cyclin d, putative [Ricinus communis]
          Length = 386

 Score =  203 bits (517), Expect = 1e-50
 Identities = 108/165 (65%), Positives = 125/165 (75%), Gaps = 2/165 (1%)
 Frame = -2

Query: 489 IMSLSCSDCFSDLICSEDARTLXXXXXXXXXXXXF--PDGIEESIAEFVEGEGTHEPLEF 316
           IMSLSCSDCF+DL+CSED+  +               P G  ESIA F+E E    P  F
Sbjct: 39  IMSLSCSDCFNDLLCSEDSSEIFSTGDSPEYSSDLESPAGTVESIASFIEDERNFVP-GF 97

Query: 315 DYMARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSW 136
           DY++RFQS+SLD SAR+DSV+WILKVQ ++ FQPLTAYL+VNY+DRFL  R LPQ+ G W
Sbjct: 98  DYLSRFQSRSLDASAREDSVAWILKVQTYYRFQPLTAYLSVNYLDRFLYSRSLPQSKG-W 156

Query: 135 PLQLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRME 1
           P+QLLSVACLSLA KMEE LVPSLLDLQVEG K+IFEPRTI RME
Sbjct: 157 PMQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRME 201


>gb|AAL47479.1| cyclin D1 [Helianthus tuberosus]
          Length = 315

 Score =  196 bits (499), Expect = 1e-48
 Identities = 104/163 (63%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
 Frame = -2

Query: 486 MSLSCSDCFSDLICSEDARTLXXXXXXXXXXXXFPDG-IEESIAEFVEGEGTHEPLEFDY 310
           MS+SCSDCFSDL+C ED+  L               G  ++SIAEF+E E    P   DY
Sbjct: 1   MSISCSDCFSDLLCCEDSGILSGDDRPECSYDFEYSGDFDDSIAEFIEQERKFVP-GIDY 59

Query: 309 MARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPL 130
           + RFQSQ LD SAR++SV+WILKVQ F+ FQPLTAYL+VNY+DRF+  RG P ANG WPL
Sbjct: 60  VERFQSQVLDASAREESVAWILKVQRFYGFQPLTAYLSVNYLDRFIYCRGFPVANG-WPL 118

Query: 129 QLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRME 1
           QLLSVACLSLA KMEETL+PS+LDLQVEG K+IFEP+TI RME
Sbjct: 119 QLLSVACLSLAAKMEETLIPSILDLQVEGAKYIFEPKTIRRME 161


>ref|XP_002268394.1| PREDICTED: cyclin-D1-1 [Vitis vinifera]
           gi|296086502|emb|CBI32091.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  196 bits (499), Expect = 1e-48
 Identities = 108/162 (66%), Positives = 120/162 (74%)
 Frame = -2

Query: 486 MSLSCSDCFSDLICSEDARTLXXXXXXXXXXXXFPDGIEESIAEFVEGEGTHEPLEFDYM 307
           MSLS SD FSDL+C ED+  L             P  IEESIA F+E E    P  FDY+
Sbjct: 1   MSLSYSDRFSDLLCGEDSSILSGDLPECSSDLESPTDIEESIAGFIEDERNFVP-GFDYL 59

Query: 306 ARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPLQ 127
           ARF+S SLD SAR++SV+WILKVQA+  FQPLTAYL+VNY+DRFL  R LPQ NG WPLQ
Sbjct: 60  ARFRSHSLDASAREESVAWILKVQAYHGFQPLTAYLSVNYLDRFLYSRRLPQTNG-WPLQ 118

Query: 126 LLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRME 1
           LLSVACLSLA KMEE LVPSLLDLQVEG KFIFE +TI RME
Sbjct: 119 LLSVACLSLAAKMEEPLVPSLLDLQVEGAKFIFESKTIRRME 160


>ref|XP_004135474.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score =  190 bits (483), Expect = 9e-47
 Identities = 100/163 (61%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
 Frame = -2

Query: 486 MSLSCSDCFSDLICSEDAR-TLXXXXXXXXXXXXFPDGIEESIAEFVEGEGTHEPLEFDY 310
           MS+S S+CFS+L+C ED+                 P  +EESI+ F++ E    P ++D 
Sbjct: 1   MSVSISNCFSNLLCQEDSSGVFSGESPGCSSDLESPACVEESISVFIKNERHFVP-DYDC 59

Query: 309 MARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPL 130
            +RFQS SLD +AR DS++WILKVQA++ FQPLTAYL+VNY+DRFL  R LPQ+NG WPL
Sbjct: 60  FSRFQSPSLDAAARLDSIAWILKVQAYYGFQPLTAYLSVNYLDRFLCSRRLPQSNG-WPL 118

Query: 129 QLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRME 1
           QLLSVACLSLA KMEE LVP+LLDLQVEG K+IFEPRTICRME
Sbjct: 119 QLLSVACLSLAAKMEEPLVPALLDLQVEGAKYIFEPRTICRME 161


>ref|XP_004155401.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
          Length = 335

 Score =  190 bits (483), Expect = 9e-47
 Identities = 100/163 (61%), Positives = 122/163 (74%), Gaps = 1/163 (0%)
 Frame = -2

Query: 486 MSLSCSDCFSDLICSEDAR-TLXXXXXXXXXXXXFPDGIEESIAEFVEGEGTHEPLEFDY 310
           MS+S S+CFS+L+C ED+                 P  +EESI+ F++ E    P ++D 
Sbjct: 1   MSVSISNCFSNLLCQEDSSGVFSGESPGCSSDLESPACVEESISVFIKNERHFVP-DYDC 59

Query: 309 MARFQSQSLDVSARKDSVSWILKVQAFFCFQPLTAYLAVNYMDRFLAFRGLPQANGSWPL 130
            +RFQS SLD +AR DS++WILKVQA++ FQPLTAYL+VNY+DRFL  R LPQ+NG WPL
Sbjct: 60  FSRFQSPSLDAAARLDSIAWILKVQAYYGFQPLTAYLSVNYLDRFLCSRRLPQSNG-WPL 118

Query: 129 QLLSVACLSLAVKMEETLVPSLLDLQVEGTKFIFEPRTICRME 1
           QLLSVACLSLA KMEE LVP+LLDLQVEG K+IFEPRTICRME
Sbjct: 119 QLLSVACLSLAAKMEEPLVPALLDLQVEGAKYIFEPRTICRME 161