BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034270
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38215.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat...   110   2e-22

>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/114 (48%), Positives = 81/114 (71%)
 Frame = -2

Query: 343 LSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKD 164
           L RA L++EA E I+ MP++PD FV GAL G  +IHG+  L     E V K++  +EP+ 
Sbjct: 453 LGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVEL----GESVMKKIEKIEPRK 508

Query: 163 SGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGCSSIEVDQNVHEFSAGE 2
            GAY+LMSNIY+S ++W +++K+R+TM+E  ++K  GCSSIE+D  +HEF  G+
Sbjct: 509 DGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGD 562


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/114 (48%), Positives = 81/114 (71%)
 Frame = -2

Query: 343 LSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKD 164
           L RA L++EA E I+ MP++PD FV GAL G  +IHG+  L     E V K++  +EP+ 
Sbjct: 475 LGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVEL----GESVMKKIEKIEPRK 530

Query: 163 SGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGCSSIEVDQNVHEFSAGE 2
            GAY+LMSNIY+S ++W +++K+R+TM+E  ++K  GCSSIE+D  +HEF  G+
Sbjct: 531 DGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQKGD 584


>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/114 (48%), Positives = 79/114 (69%)
 Frame = -2

Query: 343 LSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKD 164
           L RA  LDEA +++K MPM+ +  VWGAL GG R+H +  L+E     V K+L +LEP +
Sbjct: 394 LGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEG----VLKQLIALEPSN 449

Query: 163 SGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGCSSIEVDQNVHEFSAGE 2
           SG Y+L+SNIY+++ +W+++ K+R  M E G+KK+ G S IEVD  VHEF  G+
Sbjct: 450 SGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGD 503


>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/114 (48%), Positives = 76/114 (66%)
 Frame = -2

Query: 343 LSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKD 164
           L RA LL+EA ++I  MPMKP+  VWGAL GG ++H +  L E     V K+L  LEP +
Sbjct: 463 LGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQ----VLKKLIELEPWN 518

Query: 163 SGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGCSSIEVDQNVHEFSAGE 2
           SG Y+ +SNIY+ N +W+ + K+R TM+E  ++KI  CS IE+D  VHEF  G+
Sbjct: 519 SGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572


>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/114 (48%), Positives = 76/114 (66%)
 Frame = -2

Query: 343 LSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGEKCLLEDEDEDVRKELASLEPKD 164
           L RA LL+EA ++I  MPMKP+  VWGAL GG ++H +  L E     V K+L  LEP +
Sbjct: 463 LGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQ----VLKKLIELEPWN 518

Query: 163 SGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGCSSIEVDQNVHEFSAGE 2
           SG Y+ +SNIY+ N +W+ + K+R TM+E  ++KI  CS IE+D  VHEF  G+
Sbjct: 519 SGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGD 572