BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033993
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21
emb|CBI29560.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|2...   104   9e-21
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]   103   1e-20
ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    95   5e-18

>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/89 (61%), Positives = 67/89 (75%)
 Frame = -2

Query: 267 DRGDTLSAFNLFTQMRLMGLEMDGFTLSGLLNASRDDIVLITQIHSVAVCSAFDAFVSVC 88
           D G+T  A  LF+ MR MGL+MDGFTLS ++ A  DD+ LI Q+HSVAV S FD++VSV 
Sbjct: 117 DCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN 176

Query: 87  NALLTYYSKNGFLEEAKRVFDEMSVIKDE 1
           NALLTYY KNG L++AKRVF  M  I+DE
Sbjct: 177 NALLTYYGKNGDLDDAKRVFYGMGGIRDE 205


>emb|CBI29560.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/89 (61%), Positives = 67/89 (75%)
 Frame = -2

Query: 267 DRGDTLSAFNLFTQMRLMGLEMDGFTLSGLLNASRDDIVLITQIHSVAVCSAFDAFVSVC 88
           D G+T  A  LF+ MR MGL+MDGFTLS ++ A  DD+ LI Q+HSVAV S FD++VSV 
Sbjct: 117 DCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN 176

Query: 87  NALLTYYSKNGFLEEAKRVFDEMSVIKDE 1
           NALLTYY KNG L++AKRVF  M  I+DE
Sbjct: 177 NALLTYYGKNGDLDDAKRVFYGMGGIRDE 205


>ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|222861445|gb|EEE98987.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  104 bits (259), Expect = 9e-21
 Identities = 54/90 (60%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
 Frame = -2

Query: 267 DRGDTLSAFNLFTQMRLMGLEMDGFTLSGLLNASRDDIVLITQIHSVAVCSAFDAFVSVC 88
           DRGDTLSA +LF +MR MGL MDGFT SG++ A  + + LI Q+HS+A  S FD++VSV 
Sbjct: 117 DRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVK 176

Query: 87  NALLTYYSKNGFLEEAKRVFDEM-SVIKDE 1
           N+LLTYYSKNG LEEA+ VF+ M   ++DE
Sbjct: 177 NSLLTYYSKNGILEEAEMVFNGMGEEVRDE 206


>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/89 (60%), Positives = 66/89 (74%)
 Frame = -2

Query: 267 DRGDTLSAFNLFTQMRLMGLEMDGFTLSGLLNASRDDIVLITQIHSVAVCSAFDAFVSVC 88
           D G+T  A  LF+ MR MGL+MD FTLS ++ A  DD+ LI Q+HSVAV S FD++VSV 
Sbjct: 117 DCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGLIGQLHSVAVSSGFDSYVSVN 176

Query: 87  NALLTYYSKNGFLEEAKRVFDEMSVIKDE 1
           NALLTYY KNG L++AKRVF  M  I+DE
Sbjct: 177 NALLTYYGKNGDLDDAKRVFYGMGGIRDE 205


>ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/88 (53%), Positives = 66/88 (75%)
 Frame = -2

Query: 264 RGDTLSAFNLFTQMRLMGLEMDGFTLSGLLNASRDDIVLITQIHSVAVCSAFDAFVSVCN 85
           RGDT  AF LF +MR   L+MDGFTLSG++ A   ++ LI Q+H+++V +  D++VSV N
Sbjct: 118 RGDTQPAFQLFLEMREAFLDMDGFTLSGIITACGINVGLIRQLHALSVVTGLDSYVSVGN 177

Query: 84  ALLTYYSKNGFLEEAKRVFDEMSVIKDE 1
           AL+T YSKNGFL+EA+R+F  +S  +DE
Sbjct: 178 ALITSYSKNGFLKEARRIFHWLSEDRDE 205