BLASTX nr result

ID: Coptis24_contig00033990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033990
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40240.3| unnamed protein product [Vitis vinifera]              114   1e-23
emb|CBI40238.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002532015.1| ATP-binding cassette transporter, putative [...   111   7e-23
emb|CBI40242.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_003555459.1| PREDICTED: ABC transporter G family member 3...   109   3e-22

>emb|CBI40240.3| unnamed protein product [Vitis vinifera]
          Length = 2196

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/99 (61%), Positives = 70/99 (70%), Gaps = 6/99 (6%)
 Frame = +3

Query: 27   EPTVGKILLRSRGMFVEDYWYWICIGALFGYSFLFNGCFIAALTYLNPLGNSNSVIMEED 206
            EPTVGK LL+ RGMFV+ YWYWIC+GAL G+S LFN CFIAALTYLNPL  SNSVI++ED
Sbjct: 1466 EPTVGKALLKERGMFVDGYWYWICVGALTGFSLLFNICFIAALTYLNPLEGSNSVIIDED 1525

Query: 207  GEKSS-----SNGD-SSRTSEIGSASSIRMFKGIQMAAR 305
             EK S     SN +    T+E  SAS   M +GI M  R
Sbjct: 1526 DEKKSEKQFYSNKEHKMTTAERNSASVAPMPQGIDMEVR 1564


>emb|CBI40238.3| unnamed protein product [Vitis vinifera]
          Length = 1450

 Score =  112 bits (279), Expect = 4e-23
 Identities = 56/109 (51%), Positives = 73/109 (66%), Gaps = 5/109 (4%)
 Frame = +3

Query: 3    PTNDPTTHEPTVGKILLRSRGMFVEDYWYWICIGALFGYSFLFNGCFIAALTYLNPLGNS 182
            P  D    EPTVGK LL++RGMFV+ YWYWIC+GAL G+S LFN CFI ALTYL+PLG+S
Sbjct: 720  PNIDQRIPEPTVGKALLKARGMFVDGYWYWICVGALMGFSLLFNICFIVALTYLDPLGDS 779

Query: 183  NSVIMEEDGEKSS-----SNGDSSRTSEIGSASSIRMFKGIQMAARTPR 314
             SVI++E+ E+ S     SN     T+   ++++  M +GI M  R  R
Sbjct: 780  KSVIIDEENEEKSEKQFFSNKQHDLTTPERNSATAPMSEGIDMEVRKTR 828


>ref|XP_002532015.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223528327|gb|EEF30370.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1211

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/96 (53%), Positives = 73/96 (76%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3   PTNDPTTHEPTVGKILLRSRGMFVEDYWYWICIGALFGYSFLFNGCFIAALTYLNPLGNS 182
           P NDPT  +PTVGK+LL+ RGMF+E+YWYWI + AL G+S LFN  F+ ALTYL+PLG+S
Sbjct: 529 PNNDPTFSQPTVGKVLLKMRGMFLEEYWYWISVAALVGFSLLFNILFVWALTYLDPLGDS 588

Query: 183 NSVIMEED--GEKSSSNGDSSRTSEIGSASSIRMFK 284
            S+I+E+D   +K SS G  +R++E+ S S+  +++
Sbjct: 589 KSIILEDDESKKKMSSTGHKTRSTEMTSLSTAPLYE 624


>emb|CBI40242.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  110 bits (275), Expect = 1e-22
 Identities = 57/102 (55%), Positives = 70/102 (68%), Gaps = 6/102 (5%)
 Frame = +3

Query: 27  EPTVGKILLRSRGMFVEDYWYWICIGALFGYSFLFNGCFIAALTYLNPLGNSNSVIMEED 206
           EPTVGK LL++RGMFV+ YWYWI +GAL G+S LFN CFIAALTYL+PLG+S SVI++E+
Sbjct: 658 EPTVGKALLKARGMFVDGYWYWISVGALLGFSLLFNICFIAALTYLDPLGDSKSVIIDEE 717

Query: 207 GEKSSSNGDSSR------TSEIGSASSIRMFKGIQMAARTPR 314
            E+ S     S       T E  SAS+  M +GI M  R  R
Sbjct: 718 NEEKSEKQFYSNKQHDLTTPERNSASTAPMSEGIDMEVRNTR 759


>ref|XP_003555459.1| PREDICTED: ABC transporter G family member 39-like [Glycine max]
          Length = 1456

 Score =  109 bits (272), Expect = 3e-22
 Identities = 54/95 (56%), Positives = 66/95 (69%), Gaps = 4/95 (4%)
 Frame = +3

Query: 3    PTNDPTTHEPTVGKILLRSRGMFVEDYWYWICIGALFGYSFLFNGCFIAALTYLNPLGNS 182
            P  D    EPTVGK LLR R MF EDYWYWI IGAL G+S LFN CFI ALT+LNP G+S
Sbjct: 750  PNTDHRIPEPTVGKALLRIRSMFTEDYWYWISIGALLGFSLLFNICFIIALTFLNPYGDS 809

Query: 183  NSVIMEEDGEKSSSNGDSS----RTSEIGSASSIR 275
             S+I+EE+ EK  +  DSS    ++ E G+A++ R
Sbjct: 810  KSIILEEENEKKGTTEDSSASTDKSFETGTATTKR 844


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