BLASTX nr result

ID: Coptis24_contig00033984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033984
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycin...    61   8e-08
ref|XP_003529016.1| PREDICTED: cyclin-U4-1-like [Glycine max]          60   2e-07
ref|XP_002327025.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002511026.1| cyclin-dependent protein kinase, putative [R...    59   4e-07
ref|XP_002526473.1| cyclin-dependent protein kinase, putative [R...    58   9e-07

>ref|NP_001235331.1| uncharacterized protein LOC100305689 [Glycine max]
           gi|255626323|gb|ACU13506.1| unknown [Glycine max]
          Length = 209

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/43 (74%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
 Frame = -3

Query: 128 TPLEMPKVINFLSSLLEKVAEANDNNRDLQQ-QKISVFHGLTR 3
           +P  MPKVI FL SLLE+VAE+ND+N  LQQ QKISVFHGLTR
Sbjct: 8   SPSVMPKVITFLCSLLERVAESNDHNHHLQQHQKISVFHGLTR 50


>ref|XP_003529016.1| PREDICTED: cyclin-U4-1-like [Glycine max]
          Length = 202

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/42 (73%), Positives = 36/42 (85%)
 Frame = -3

Query: 128 TPLEMPKVINFLSSLLEKVAEANDNNRDLQQQKISVFHGLTR 3
           +P  MPKVI FLSSLLE+VAE+ND+N+  Q QKISVFHGLTR
Sbjct: 6   SPSVMPKVITFLSSLLERVAESNDHNQ--QHQKISVFHGLTR 45


>ref|XP_002327025.1| predicted protein [Populus trichocarpa] gi|222835340|gb|EEE73775.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -3

Query: 116 MPKVINFLSSLLEKVAEANDNNRDLQQQKISVFHGLTR 3
           MPK I FLSSLL++VA++ND NR+ Q QKISVFHGLTR
Sbjct: 10  MPKSITFLSSLLQRVADSNDLNREFQPQKISVFHGLTR 47


>ref|XP_002511026.1| cyclin-dependent protein kinase, putative [Ricinus communis]
           gi|223550141|gb|EEF51628.1| cyclin-dependent protein
           kinase, putative [Ricinus communis]
          Length = 203

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = -3

Query: 158 MGDLETISSGTPLEMPKVINFLSSLLEKVAEANDNNRDLQQQKISVFHGLTR 3
           M DLE     T + MPKV+ FLSSLL++VAE+ND +  L  Q+ISVFHGLTR
Sbjct: 1   MADLEA----TVVVMPKVVTFLSSLLQRVAESNDLSHQLHPQRISVFHGLTR 48


>ref|XP_002526473.1| cyclin-dependent protein kinase, putative [Ricinus communis]
           gi|223534148|gb|EEF35864.1| cyclin-dependent protein
           kinase, putative [Ricinus communis]
          Length = 203

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 128 TPLEMPKVINFLSSLLEKVAEANDNNRDLQQQKISVFHGLTR 3
           +P  MPK+I FLSSLL++VAE+ND N  +  QKISVFHGLTR
Sbjct: 6   SPNLMPKLITFLSSLLQRVAESNDLNLQIHTQKISVFHGLTR 47


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