BLASTX nr result

ID: Coptis24_contig00033979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033979
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD31600.1| acetyl-CoA carboxylase carboxyltransferase beta s...   194   8e-48
gb|ADD31602.1| acetyl-CoA carboxylase carboxyltransferase beta s...   193   1e-47
ref|YP_002836099.1| acetyl-CoA carboxylase carboxyltransferase b...   191   4e-47
gb|ADD31605.1| acetyl-CoA carboxylase carboxyltransferase beta s...   188   4e-46
ref|YP_001294193.1| acetyl-CoA carboxylase carboxyltransferase b...   187   1e-45

>gb|ADD31600.1| acetyl-CoA carboxylase carboxyltransferase beta subunit protein
           [Berberidopsis corallina]
          Length = 501

 Score =  194 bits (492), Expect = 8e-48
 Identities = 92/124 (74%), Positives = 105/124 (84%), Gaps = 3/124 (2%)
 Frame = -3

Query: 363 IHLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSEDPVMNNM 184
           IHLLYFH NRGQE SMEK WFNSMLS +ELEHRCGLSKS+  +GPIENT+GSEDP +N+ 
Sbjct: 3   IHLLYFHVNRGQESSMEKRWFNSMLSNKELEHRCGLSKSMDSLGPIENTSGSEDPSINDT 62

Query: 183 ---IHGWDDSSNNVDHFFGIRDIRSLISDDTFLVRDSNGENYSIYFDIENKIFEIENDRS 13
              IH W DS +NVDH F +RDIR+ ISDDTFLVRDSNG++YSIYFDIEN IFE++ND S
Sbjct: 63  DKNIHSWSDSYSNVDHLFVVRDIRNFISDDTFLVRDSNGDSYSIYFDIENHIFEVDNDHS 122

Query: 12  FLSE 1
           FLSE
Sbjct: 123 FLSE 126


>gb|ADD31602.1| acetyl-CoA carboxylase carboxyltransferase beta subunit protein
           [Cornus florida]
          Length = 509

 Score =  193 bits (491), Expect = 1e-47
 Identities = 91/127 (71%), Positives = 105/127 (82%), Gaps = 6/127 (4%)
 Frame = -3

Query: 363 IHLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSEDPVMNNM 184
           IHLLYFH+NRGQE SMEKWWFNSML K+ELEHRCGLSKS   +GPIENT+ SEDP  N  
Sbjct: 3   IHLLYFHANRGQENSMEKWWFNSMLFKKELEHRCGLSKSTGSLGPIENTSESEDPDRNKN 62

Query: 183 IHGWDD------SSNNVDHFFGIRDIRSLISDDTFLVRDSNGENYSIYFDIENKIFEIEN 22
           IH W D      S++NVDH F ++DIR+ ISDDTFLVRD+NG++YSIYFDIEN+IFEI+N
Sbjct: 63  IHSWIDSDGSSYSNSNVDHLFSVKDIRNFISDDTFLVRDNNGDSYSIYFDIENQIFEIDN 122

Query: 21  DRSFLSE 1
           D SFLSE
Sbjct: 123 DHSFLSE 129


>ref|YP_002836099.1| acetyl-CoA carboxylase carboxyltransferase beta subunit
           [Megaleranthis saniculifolia]
           gi|226933891|gb|ACO92024.1| acetyl-CoA carboxylase
           carboxyltransferase beta subunit [Megaleranthis
           saniculifolia]
          Length = 491

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/108 (85%), Positives = 97/108 (89%), Gaps = 2/108 (1%)
 Frame = -3

Query: 318 MEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSEDPVMNNMIHGWDD--SSNNVDH 145
           MEKWWFNSMLSKEELEHRCGLSKSL GIGP+ NT+G EDPV+NNMIHGW D  SSNNVDH
Sbjct: 1   MEKWWFNSMLSKEELEHRCGLSKSLEGIGPLGNTDGGEDPVINNMIHGWVDSNSSNNVDH 60

Query: 144 FFGIRDIRSLISDDTFLVRDSNGENYSIYFDIENKIFEIENDRSFLSE 1
            FG+ DIRSLISDDTFLVRDSNGENYSIY DIEN IFEIE+D SFLSE
Sbjct: 61  LFGVSDIRSLISDDTFLVRDSNGENYSIYLDIENMIFEIEDDHSFLSE 108


>gb|ADD31605.1| acetyl-CoA carboxylase carboxyltransferase beta subunit protein
           [Gunnera manicata]
          Length = 515

 Score =  188 bits (477), Expect = 4e-46
 Identities = 91/128 (71%), Positives = 106/128 (82%), Gaps = 7/128 (5%)
 Frame = -3

Query: 363 IHLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSEDPVMNNM 184
           IHLLYFH+NRG E SMEK WFNSMLS EELEHRCGLSKS+  +GPIENT+GSEDP +N+ 
Sbjct: 3   IHLLYFHANRGPESSMEKCWFNSMLSNEELEHRCGLSKSMDSLGPIENTSGSEDPTINDT 62

Query: 183 ---IHGWDD----SSNNVDHFFGIRDIRSLISDDTFLVRDSNGENYSIYFDIENKIFEIE 25
              IH W D    SS+NVD  F +RDI++LISDDTFLVRDSNG++YSIYFD+EN IFE++
Sbjct: 63  DKNIHNWSDIDSLSSSNVDLLFSVRDIKNLISDDTFLVRDSNGDSYSIYFDMENHIFEVD 122

Query: 24  NDRSFLSE 1
           ND SFLSE
Sbjct: 123 NDHSFLSE 130


>ref|YP_001294193.1| acetyl-CoA carboxylase carboxyltransferase beta subunit [Buxus
           microphylla] gi|146762294|gb|ABQ45258.1| acetyl-CoA
           carboxylase carboxyltransferase beta subunit [Buxus
           microphylla]
          Length = 506

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/128 (71%), Positives = 103/128 (80%), Gaps = 7/128 (5%)
 Frame = -3

Query: 363 IHLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSEDPVMNNM 184
           IHLLY H+NRGQEGSMEKWWFNSMLS EELEH CGLSKS+  +GPI NT+G ED ++NNM
Sbjct: 3   IHLLYVHANRGQEGSMEKWWFNSMLSNEELEHACGLSKSMESLGPIGNTSGGEDHIINNM 62

Query: 183 ---IHGWDDSS----NNVDHFFGIRDIRSLISDDTFLVRDSNGENYSIYFDIENKIFEIE 25
              IH W DS     +NV   FG+R I+  ISDDTFLVRDSNG++YSIYFDIENKIFEI+
Sbjct: 63  DKNIHSWGDSGSSSCSNVYPLFGVRGIQGFISDDTFLVRDSNGDSYSIYFDIENKIFEID 122

Query: 24  NDRSFLSE 1
           ND SFLSE
Sbjct: 123 NDHSFLSE 130


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