BLASTX nr result

ID: Coptis24_contig00033950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033950
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|2235...   169   2e-40
ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_004155493.1| PREDICTED: dynamin-related protein 3A-like [...   163   2e-38
ref|XP_004137068.1| PREDICTED: dynamin-related protein 3A-like [...   163   2e-38

>ref|XP_002532763.1| dynamin, putative [Ricinus communis] gi|223527492|gb|EEF29620.1|
           dynamin, putative [Ricinus communis]
          Length = 837

 Score =  169 bits (428), Expect = 2e-40
 Identities = 87/105 (82%), Positives = 97/105 (92%)
 Frame = +1

Query: 1   DRCGVAQLSKKLNQILVRHIKKALPGLRSQISSALVSVAKELASYGQIAESKAGQGSLLL 180
           DRCGV QL+KKLNQILV+HIK  LPGL+S+ISSAL S+AKE ASYG+I ESKAGQG+LLL
Sbjct: 295 DRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALCSLAKEHASYGEITESKAGQGALLL 354

Query: 181 KILTKYSEDFSSMVEGKNEQVSTSELSGGARIHYIFQSIFVKSLE 315
            IL+KYSE FSSMVEGKNE++STSELSGGARIHYIFQSIFVKSLE
Sbjct: 355 NILSKYSEAFSSMVEGKNEEMSTSELSGGARIHYIFQSIFVKSLE 399


>ref|XP_002327916.1| predicted protein [Populus trichocarpa] gi|222837325|gb|EEE75704.1|
           predicted protein [Populus trichocarpa]
          Length = 821

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/105 (81%), Positives = 97/105 (92%)
 Frame = +1

Query: 1   DRCGVAQLSKKLNQILVRHIKKALPGLRSQISSALVSVAKELASYGQIAESKAGQGSLLL 180
           DRCGV QL+KKLNQILV+HIK  LPGL+S+ISSALVSVAKE ASYG+I ESKAGQG+L+L
Sbjct: 298 DRCGVPQLAKKLNQILVQHIKTILPGLKSRISSALVSVAKEHASYGEITESKAGQGTLIL 357

Query: 181 KILTKYSEDFSSMVEGKNEQVSTSELSGGARIHYIFQSIFVKSLE 315
            IL+KYSE FSSMVEG+NE++S SELSGGARIHYIFQSIFVKSLE
Sbjct: 358 NILSKYSEAFSSMVEGRNEEMSRSELSGGARIHYIFQSIFVKSLE 402


>ref|XP_002309855.1| predicted protein [Populus trichocarpa] gi|222852758|gb|EEE90305.1|
           predicted protein [Populus trichocarpa]
          Length = 835

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/108 (79%), Positives = 98/108 (90%), Gaps = 3/108 (2%)
 Frame = +1

Query: 1   DRCGVAQLSKKLNQILVRHIKKALPGLRSQISSALVSVAKELASYGQIAESKA---GQGS 171
           DRCGV QL+KKLNQILV+HIK  LPGL+S+ISSALVSVAKE ASYG+I ESKA   GQG+
Sbjct: 289 DRCGVPQLAKKLNQILVQHIKSILPGLKSRISSALVSVAKEHASYGEITESKACIAGQGT 348

Query: 172 LLLKILTKYSEDFSSMVEGKNEQVSTSELSGGARIHYIFQSIFVKSLE 315
           L+L IL+KYSE FSSM+EGKNE++STSEL+GGARIHYIFQSIFVKSLE
Sbjct: 349 LILNILSKYSEAFSSMIEGKNEEMSTSELAGGARIHYIFQSIFVKSLE 396


>ref|XP_004155493.1| PREDICTED: dynamin-related protein 3A-like [Cucumis sativus]
          Length = 817

 Score =  163 bits (412), Expect = 2e-38
 Identities = 83/105 (79%), Positives = 94/105 (89%)
 Frame = +1

Query: 1   DRCGVAQLSKKLNQILVRHIKKALPGLRSQISSALVSVAKELASYGQIAESKAGQGSLLL 180
           DRCGV QL+KKLNQILV+HI   LPGL+S+ISSALVS AKE ASYG+I ESKAGQG+LLL
Sbjct: 288 DRCGVPQLAKKLNQILVQHINAILPGLKSRISSALVSAAKEHASYGEITESKAGQGALLL 347

Query: 181 KILTKYSEDFSSMVEGKNEQVSTSELSGGARIHYIFQSIFVKSLE 315
            IL+KY E FSSMV+GKNE++STSEL+GG RIHYIFQSIFVKSLE
Sbjct: 348 NILSKYCEAFSSMVDGKNEEMSTSELTGGTRIHYIFQSIFVKSLE 392


>ref|XP_004137068.1| PREDICTED: dynamin-related protein 3A-like [Cucumis sativus]
          Length = 808

 Score =  163 bits (412), Expect = 2e-38
 Identities = 83/105 (79%), Positives = 94/105 (89%)
 Frame = +1

Query: 1   DRCGVAQLSKKLNQILVRHIKKALPGLRSQISSALVSVAKELASYGQIAESKAGQGSLLL 180
           DRCGV QL+KKLNQILV+HI   LPGL+S+ISSALVS AKE ASYG+I ESKAGQG+LLL
Sbjct: 288 DRCGVPQLAKKLNQILVQHINAILPGLKSRISSALVSAAKEHASYGEITESKAGQGALLL 347

Query: 181 KILTKYSEDFSSMVEGKNEQVSTSELSGGARIHYIFQSIFVKSLE 315
            IL+KY E FSSMV+GKNE++STSEL+GG RIHYIFQSIFVKSLE
Sbjct: 348 NILSKYCEAFSSMVDGKNEEMSTSELTGGTRIHYIFQSIFVKSLE 392


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