BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033933
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002460305.1| hypothetical protein SORBIDRAFT_02g026226 [S...    57   2e-06
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    55   6e-06
ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    55   8e-06
ref|XP_003592984.1| F-box/kelch-repeat protein [Medicago truncat...    55   8e-06

>ref|XP_002460305.1| hypothetical protein SORBIDRAFT_02g026226 [Sorghum bicolor]
           gi|241923682|gb|EER96826.1| hypothetical protein
           SORBIDRAFT_02g026226 [Sorghum bicolor]
          Length = 294

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/61 (37%), Positives = 40/61 (65%)
 Frame = -1

Query: 262 VSSLTEDLLMEVLSRLPIKYIVQCKSICKSWCTLISSNHFIIYQLNHVNKGCPKLILASN 83
           V+ + +D++  +LS+LP K +++CKS+CK+W T+ISS HFI   L+        L+++  
Sbjct: 4   VACIPDDVIFNILSQLPTKSVIRCKSVCKAWLTIISSEHFIRAHLDFSRVRSTTLVVSRR 63

Query: 82  Y 80
           Y
Sbjct: 64  Y 64


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/73 (35%), Positives = 48/73 (65%)
 Frame = -1

Query: 265 IVSSLTEDLLMEVLSRLPIKYIVQCKSICKSWCTLISSNHFIIYQLNHVNKGCPKLILAS 86
           ++++L  +++ E+LSRLP+K +++ +S CK W ++I S HF+++   H+NK    LIL  
Sbjct: 1   MMANLPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFVLF---HLNKSHSSLILRH 57

Query: 85  NYHKNFHSLDYEN 47
             H   +SLD ++
Sbjct: 58  RSH--LYSLDLKS 68


>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/76 (35%), Positives = 48/76 (63%)
 Frame = -1

Query: 262 VSSLTEDLLMEVLSRLPIKYIVQCKSICKSWCTLISSNHFIIYQLNHVNKGCPKLILASN 83
           +++L  +++ E+LSRLP+K +++ +S CK W ++I S HFI++   H+NK    LIL   
Sbjct: 1   MANLPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFILF---HLNKSHTSLIL--R 55

Query: 82  YHKNFHSLDYENCNAP 35
           +    +SLD ++   P
Sbjct: 56  HRSQLYSLDLKSLLDP 71


>ref|XP_003592984.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355482032|gb|AES63235.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 364

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 17/79 (21%)
 Frame = -1

Query: 253 LTEDLLMEVLSRLPIKYIVQCKSICKSWCTLISSNHFIIYQLNH---VNKGCPKLI---- 95
           L  +L++EVLS LP++Y+++ K +CKSW TLIS   FI    NH   + + CPKL+    
Sbjct: 46  LLPELILEVLSFLPVEYLMRMKCVCKSWNTLISDPTFIKMHFNHTFRLLENCPKLLSYDL 105

Query: 94  ----------LASNYHKNF 68
                     + +NY K F
Sbjct: 106 PYFDMLVGSCVGNNYRKTF 124