BLASTX nr result

ID: Coptis24_contig00033930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033930
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312343.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002519198.1| calmodulin-binding transcription activator (...   132   2e-29
ref|XP_002314926.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
ref|XP_002870178.1| calmodulin-binding transcription activator 5...   127   1e-27
gb|AEX07778.1| calmodulin-binding transcription factor SR3L [Sol...   122   4e-26

>ref|XP_002312343.1| predicted protein [Populus trichocarpa] gi|222852163|gb|EEE89710.1|
           predicted protein [Populus trichocarpa]
          Length = 845

 Score =  136 bits (343), Expect = 2e-30
 Identities = 72/160 (45%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
 Frame = +1

Query: 13  YSEETGDEMNSYAKEKHFEMLTAGMDESSYMVGNDGSQIQDSCGRWAKNMKTESPSSIDD 192
           Y + TG ++   A+ K+  +L  G  +S  ++ NDG Q QDS GRW  ++  +SP S+DD
Sbjct: 214 YRQLTGSQVYLDAQRKNSVVL--GARDSLDILINDGLQSQDSFGRWMNSIIDDSPVSVDD 271

Query: 193 LLAQSPVSTGQGSSTSTNXXXXXXXXQEQLFSVTDISPSWGFSTEETKVIVIGYFHGAHS 372
              +SP+S+G  S  S          QEQ+F +TD SP+WGFS E TK++V GYFH  + 
Sbjct: 272 ATVESPISSGYDSFASPGMDQHQSSIQEQMFIITDFSPAWGFSNETTKILVTGYFHEQYL 331

Query: 373 HLA--NLYCVFGNTCVTAEKVQVGVFRCIARPCSPGLVNL 486
           HLA  NL+C+ G+  V AE VQ GV+ C+  P SPGLVNL
Sbjct: 332 HLAKSNLFCICGDAFVPAEIVQAGVYSCMVSPHSPGLVNL 371


>ref|XP_002519198.1| calmodulin-binding transcription activator (camta), plants,
           putative [Ricinus communis] gi|223541513|gb|EEF43062.1|
           calmodulin-binding transcription activator (camta),
           plants, putative [Ricinus communis]
          Length = 918

 Score =  132 bits (333), Expect = 2e-29
 Identities = 69/165 (41%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
 Frame = +1

Query: 1   PTCSYSEETGDEMNSYAKEKHFEMLTAGMDESSYMVGNDGSQIQDSCGRWAKNMKTESPS 180
           P   Y + TG ++NS  ++K    L  G  ++  M+ NDG Q QDS GRW   +  +SP 
Sbjct: 276 PDNEYIQSTGVQVNSNVQQKGSNFLGTG--DTLDMLVNDGLQSQDSFGRWIDYIIADSPG 333

Query: 181 SIDDLLAQSPVSTGQGSSTSTNXXXXXXXXQEQLFSVTDISPSWGFSTEETKVIVIGYFH 360
           S+D+ + +S  S+G  SSTS           EQ+F +TDISP+W FSTE TK++V+GYFH
Sbjct: 334 SVDNAVLESSFSSGLDSSTSPAIDQLQSSVPEQIFVITDISPAWAFSTETTKILVVGYFH 393

Query: 361 GAHSHLA--NLYCVFGNTCVTAEKVQVGVFRCIARPCSPGLVNLY 489
             +  LA  N++CV G+     + VQ GV+RC+  P  PG+VNL+
Sbjct: 394 EQYLQLAKSNMFCVCGDAYALVDIVQTGVYRCLVSPHFPGIVNLF 438


>ref|XP_002314926.1| predicted protein [Populus trichocarpa] gi|222863966|gb|EEF01097.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  132 bits (332), Expect = 3e-29
 Identities = 72/164 (43%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
 Frame = +1

Query: 1   PTCSYSEETGDEMNSYAKEKHFEMLTAGMDESSYMVGNDGSQIQDSCGRWAKNMKTESPS 180
           P   YS+ T  ++NS A+ K    +  G  +S   + NDG Q QDS GRW  ++   SP 
Sbjct: 280 PDSVYSQLTSAQVNSDAQRKG--SIVPGTSDSLNNLFNDGLQSQDSFGRWMSSIIDHSPC 337

Query: 181 SIDDLLAQSPVSTGQGSSTSTNXXXXXXXXQEQLFSVTDISPSWGFSTEETKVIVIGYFH 360
           S+DD + +S +S+G  S  S          QEQ F +TD SP+W FS E TK++V GYFH
Sbjct: 338 SVDDAVLESSISSGHDSFASPGIDQHQSSVQEQTFIITDFSPAWAFSNETTKILVTGYFH 397

Query: 361 GAHSHLA--NLYCVFGNTCVTAEKVQVGVFRCIARPCSPGLVNL 486
             + HLA  NL+C+ G+T   AE VQVGV+  +  P SPGLVNL
Sbjct: 398 EQYQHLAKSNLFCICGDTFARAEIVQVGVYSFMLPPHSPGLVNL 441


>ref|XP_002870178.1| calmodulin-binding transcription activator 5 [Arabidopsis lyrata
           subsp. lyrata] gi|297316014|gb|EFH46437.1|
           calmodulin-binding transcription activator 5
           [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/143 (41%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
 Frame = +1

Query: 67  EMLTAGMDESSYMVGNDGSQIQDSCGRWAKNMKTESPSSIDDLLAQSPVSTGQGSSTSTN 246
           + +  G D+    + N+G   QDS GRW  N  ++SP S+DD   ++  + GQ SST   
Sbjct: 301 DSIATGTDQPGDALLNNGYGSQDSFGRWVNNFISDSPGSVDDPSLEAVYTPGQDSSTPPT 360

Query: 247 XXXXXXXXQEQLFSVTDISPSWGFSTEETKVIVIGYFHGAHSHL--ANLYCVFGNTCVTA 420
                    EQ+F++TD+SP+W +STE+TK++V G+FH +  H   +NL+C+ G   VTA
Sbjct: 361 VFPSHSDIPEQVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHFGRSNLFCICGELRVTA 420

Query: 421 EKVQVGVFRCIARPCSPGLVNLY 489
           E +Q+GV+RC   P SPG+VNLY
Sbjct: 421 EFLQMGVYRCFLPPQSPGVVNLY 443


>gb|AEX07778.1| calmodulin-binding transcription factor SR3L [Solanum lycopersicum]
          Length = 910

 Score =  122 bits (305), Expect = 4e-26
 Identities = 66/154 (42%), Positives = 91/154 (59%), Gaps = 2/154 (1%)
 Frame = +1

Query: 34  EMNSYAKEKHFEMLTAGMDESSYMVGNDGSQIQDSCGRWAKNMKTESPSSIDDLLAQSPV 213
           +M S  ++    ++T    +S   +  D  Q QDS GRW   +  +SP SIDD   +S V
Sbjct: 295 QMTSSFEKNESGVMTVSTGDSLDSLNQDRLQTQDSFGRWMNYLIKDSPESIDDPTPESSV 354

Query: 214 STGQGSSTSTNXXXXXXXXQEQLFSVTDISPSWGFSTEETKVIVIGYFHGAHSHL--ANL 387
           STGQ  +            +EQ+F++T+I P+W  STEETK+ VIG FHG  SHL  ++L
Sbjct: 355 STGQSYA------------REQIFNITEILPAWAPSTEETKICVIGQFHGEQSHLESSSL 402

Query: 388 YCVFGNTCVTAEKVQVGVFRCIARPCSPGLVNLY 489
            CV G+ C  AE +Q GV+RCI  P +PGLVN+Y
Sbjct: 403 RCVCGDACFPAEVLQPGVYRCIVSPQTPGLVNIY 436


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