BLASTX nr result

ID: Coptis24_contig00033929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033929
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853...   264   9e-69
emb|CBI34669.3| unnamed protein product [Vitis vinifera]              262   3e-68
ref|XP_002509806.1| mitochondrial carrier protein, putative [Ric...   261   1e-67
ref|XP_004143980.1| PREDICTED: uncharacterized protein LOC101216...   239   2e-61
ref|XP_003524460.1| PREDICTED: uncharacterized protein LOC100778...   238   7e-61

>ref|XP_003631388.1| PREDICTED: uncharacterized protein LOC100853340 [Vitis vinifera]
          Length = 703

 Score =  264 bits (675), Expect = 9e-69
 Identities = 124/173 (71%), Positives = 147/173 (84%)
 Frame = -1

Query: 624 QVSSHYHNCWAAMVGILGKGGLTSLYAGWGAVLCRNIPHSIIKFYTYETLKQLLFSSEQS 445
           Q+ SHY NCW A+VGI+ KGGL SLYAGWGAVLCRN+PHSIIKFYTYE+LKQL+  S Q 
Sbjct: 480 QIGSHYQNCWNALVGIIKKGGLPSLYAGWGAVLCRNVPHSIIKFYTYESLKQLMLPSLQP 539

Query: 444 TARPSTYQTLLCGGIAGSTAALFTTPFDVVKTRLQTQIPGSLHSYDGVLHALKEIYKNEG 265
            A+P+T QTL CGG+AGSTAA FTTPFDVVKTRLQTQIPGS+  Y+ V H L+EI K+EG
Sbjct: 540 NAKPNTLQTLACGGLAGSTAAFFTTPFDVVKTRLQTQIPGSMKQYNSVFHTLQEISKHEG 599

Query: 264 LKGLYRGLSPRLVMYISQGALFFASYEFFRSIFTLELPQMCSHYIQGKQNVEE 106
           L+GLYRGL+PRLVMY+SQGALFFASYEFF+S+F LE+P++ +  I  KQ +EE
Sbjct: 600 LRGLYRGLTPRLVMYVSQGALFFASYEFFKSLFCLEMPKLHAQTIPHKQYMEE 652


>emb|CBI34669.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  262 bits (670), Expect = 3e-68
 Identities = 123/172 (71%), Positives = 146/172 (84%)
 Frame = -1

Query: 624 QVSSHYHNCWAAMVGILGKGGLTSLYAGWGAVLCRNIPHSIIKFYTYETLKQLLFSSEQS 445
           Q+ SHY NCW A+VGI+ KGGL SLYAGWGAVLCRN+PHSIIKFYTYE+LKQL+  S Q 
Sbjct: 432 QIGSHYQNCWNALVGIIKKGGLPSLYAGWGAVLCRNVPHSIIKFYTYESLKQLMLPSLQP 491

Query: 444 TARPSTYQTLLCGGIAGSTAALFTTPFDVVKTRLQTQIPGSLHSYDGVLHALKEIYKNEG 265
            A+P+T QTL CGG+AGSTAA FTTPFDVVKTRLQTQIPGS+  Y+ V H L+EI K+EG
Sbjct: 492 NAKPNTLQTLACGGLAGSTAAFFTTPFDVVKTRLQTQIPGSMKQYNSVFHTLQEISKHEG 551

Query: 264 LKGLYRGLSPRLVMYISQGALFFASYEFFRSIFTLELPQMCSHYIQGKQNVE 109
           L+GLYRGL+PRLVMY+SQGALFFASYEFF+S+F LE+P++ +  I  KQ +E
Sbjct: 552 LRGLYRGLTPRLVMYVSQGALFFASYEFFKSLFCLEMPKLHAQTIPHKQYME 603


>ref|XP_002509806.1| mitochondrial carrier protein, putative [Ricinus communis]
           gi|223549705|gb|EEF51193.1| mitochondrial carrier
           protein, putative [Ricinus communis]
          Length = 663

 Score =  261 bits (666), Expect = 1e-67
 Identities = 122/159 (76%), Positives = 137/159 (86%)
 Frame = -1

Query: 624 QVSSHYHNCWAAMVGILGKGGLTSLYAGWGAVLCRNIPHSIIKFYTYETLKQLLFSSEQS 445
           Q+ SHYHNCW A+VGI+  GGL SLY GWGAVLCRN+PHSIIKFYTYE+LKQ ++ S  S
Sbjct: 487 QIGSHYHNCWKALVGIIRNGGLPSLYTGWGAVLCRNVPHSIIKFYTYESLKQFMWPSHNS 546

Query: 444 TARPSTYQTLLCGGIAGSTAALFTTPFDVVKTRLQTQIPGSLHSYDGVLHALKEIYKNEG 265
           TA+P T QTL+CGG+AGSTAALFTTPFDVVKTRLQ QIPGS+  YD V HALKEI KNEG
Sbjct: 547 TAQPITLQTLVCGGLAGSTAALFTTPFDVVKTRLQIQIPGSMSKYDSVFHALKEIGKNEG 606

Query: 264 LKGLYRGLSPRLVMYISQGALFFASYEFFRSIFTLELPQ 148
           LKGLYRGL PRLVMY+SQGALFFASYE F+  F+LE+PQ
Sbjct: 607 LKGLYRGLIPRLVMYVSQGALFFASYESFKGFFSLEVPQ 645


>ref|XP_004143980.1| PREDICTED: uncharacterized protein LOC101216245 [Cucumis sativus]
            gi|449531539|ref|XP_004172743.1| PREDICTED:
            uncharacterized LOC101216245 [Cucumis sativus]
          Length = 676

 Score =  239 bits (611), Expect = 2e-61
 Identities = 118/174 (67%), Positives = 140/174 (80%)
 Frame = -1

Query: 624  QVSSHYHNCWAAMVGILGKGGLTSLYAGWGAVLCRNIPHSIIKFYTYETLKQLLFSSEQS 445
            QVS+HYHNCW A VG++ KGGL  LY GWGAVLCRN+PHSIIKFYTYE+LK L+ S+ Q 
Sbjct: 506  QVSAHYHNCWNAFVGVVAKGGLRGLYTGWGAVLCRNVPHSIIKFYTYESLKGLMKSNAQQ 565

Query: 444  TARPSTYQTLLCGGIAGSTAALFTTPFDVVKTRLQTQIPGSLHSYDGVLHALKEIYKNEG 265
            T    T QTL+CGG+AGSTAALFTTPFDVVKTRLQTQIPGSL  Y  V+ AL EI K EG
Sbjct: 566  T----TSQTLVCGGVAGSTAALFTTPFDVVKTRLQTQIPGSLSPYKSVIQALYEIGKKEG 621

Query: 264  LKGLYRGLSPRLVMYISQGALFFASYEFFRSIFTLELPQMCSHYIQGKQNVEEK 103
            L+GLYRGL+PRLVMY+SQGA+FF SYEF + +F+LE+P+  +  +Q    V+EK
Sbjct: 622  LQGLYRGLTPRLVMYMSQGAIFFTSYEFLKRLFSLEVPRHDTAIVQ--HRVDEK 673


>ref|XP_003524460.1| PREDICTED: uncharacterized protein LOC100778143 [Glycine max]
          Length = 643

 Score =  238 bits (607), Expect = 7e-61
 Identities = 118/174 (67%), Positives = 138/174 (79%), Gaps = 1/174 (0%)
 Frame = -1

Query: 624 QVSSHYHNCWAAMVGILGKGGLTSLYAGWGAVLCRNIPHSIIKFYTYETLKQLLFSSEQS 445
           QV SHY NCW  +VGI+  GG +SLYAGW AVLCRN+PHSIIKFYTYE+LKQ++ SS Q 
Sbjct: 474 QVGSHYRNCWDVLVGIIRNGGFSSLYAGWRAVLCRNVPHSIIKFYTYESLKQVMPSSIQ- 532

Query: 444 TARPSTYQTLLCGGIAGSTAALFTTPFDVVKTRLQTQIPGSLHSYDGVLHALKEIYKNEG 265
              P+T+QTL+CGG+AGSTAALFTTPFDV+KTRLQTQIPGS + YD VLHAL +I K+EG
Sbjct: 533 ---PNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKSEG 589

Query: 264 LKGLYRGLSPRLVMYISQGALFFASYEFFRSIFTLELPQMCSHYIQGKQ-NVEE 106
            KGLYRGL PRL+MY+SQG+LFFASYEFF+  F+LE        IQ    N EE
Sbjct: 590 FKGLYRGLIPRLIMYMSQGSLFFASYEFFKRTFSLEASHPTDLCIQDNDGNAEE 643


Top