BLASTX nr result

ID: Coptis24_contig00033888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033888
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331522.1| predicted protein [Populus trichocarpa] gi|2...   157   7e-37
ref|XP_003634852.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   156   1e-36
ref|XP_002267170.2| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   156   1e-36
emb|CBI32990.3| unnamed protein product [Vitis vinifera]              156   1e-36
ref|XP_002518426.1| Serine/threonine-protein kinase PBS1, putati...   156   2e-36

>ref|XP_002331522.1| predicted protein [Populus trichocarpa] gi|222873746|gb|EEF10877.1|
           predicted protein [Populus trichocarpa]
          Length = 672

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/95 (82%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
 Frame = -2

Query: 488 SLVRWATPQLHDIDSLAKMVDRSLNGMYPAKSLSRFADIIAQCIQPEPEFRPPMSEVVEA 309
           SLVRWATPQLHDID+LAKMVD  LNGMYPAKSLSRFADIIA C+QPEPEFRPPMSEVV+A
Sbjct: 578 SLVRWATPQLHDIDALAKMVDPILNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 637

Query: 308 LVRLMQRASVVK-RSNDESGFTFRVPDQEILDTAF 207
           LVRL+QRASVVK RS+DESGF +R PD E +D++F
Sbjct: 638 LVRLVQRASVVKRRSSDESGFAYRTPDHEAIDSSF 672


>ref|XP_003634852.1| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Vitis
           vinifera]
          Length = 174

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/95 (81%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
 Frame = -2

Query: 488 SLVRWATPQLHDIDSLAKMVDRSLNGMYPAKSLSRFADIIAQCIQPEPEFRPPMSEVVEA 309
           SLVRWATPQLHDID+LAKMVD SLNGMYPAKSLSRFADIIA C+QPEPEFRPPMSEVV+A
Sbjct: 80  SLVRWATPQLHDIDALAKMVDPSLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 139

Query: 308 LVRLMQRASVVK-RSNDESGFTFRVPDQEILDTAF 207
           LVRL+QRASVVK RS+DESGF ++ P+ E +D +F
Sbjct: 140 LVRLVQRASVVKRRSSDESGFVYKTPEHEAIDMSF 174


>ref|XP_002267170.2| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Vitis
           vinifera] gi|297741762|emb|CBI32991.3| unnamed protein
           product [Vitis vinifera]
          Length = 729

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/95 (81%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
 Frame = -2

Query: 488 SLVRWATPQLHDIDSLAKMVDRSLNGMYPAKSLSRFADIIAQCIQPEPEFRPPMSEVVEA 309
           SLVRWATPQLHDID+LAKMVD SLNGMYPAKSLSRFADIIA C+QPEPEFRPPMSEVV+A
Sbjct: 635 SLVRWATPQLHDIDALAKMVDPSLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 694

Query: 308 LVRLMQRASVVK-RSNDESGFTFRVPDQEILDTAF 207
           LVRL+QRASVVK RS+DESGF ++ P+ E +D +F
Sbjct: 695 LVRLVQRASVVKRRSSDESGFVYKTPEHEAIDMSF 729


>emb|CBI32990.3| unnamed protein product [Vitis vinifera]
          Length = 157

 Score =  156 bits (395), Expect = 1e-36
 Identities = 77/95 (81%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
 Frame = -2

Query: 488 SLVRWATPQLHDIDSLAKMVDRSLNGMYPAKSLSRFADIIAQCIQPEPEFRPPMSEVVEA 309
           SLVRWATPQLHDID+LAKMVD SLNGMYPAKSLSRFADIIA C+QPEPEFRPPMSEVV+A
Sbjct: 63  SLVRWATPQLHDIDALAKMVDPSLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 122

Query: 308 LVRLMQRASVVK-RSNDESGFTFRVPDQEILDTAF 207
           LVRL+QRASVVK RS+DESGF ++ P+ E +D +F
Sbjct: 123 LVRLVQRASVVKRRSSDESGFVYKTPEHEAIDMSF 157


>ref|XP_002518426.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
           gi|223542271|gb|EEF43813.1| Serine/threonine-protein
           kinase PBS1, putative [Ricinus communis]
          Length = 640

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/95 (81%), Positives = 87/95 (91%), Gaps = 1/95 (1%)
 Frame = -2

Query: 488 SLVRWATPQLHDIDSLAKMVDRSLNGMYPAKSLSRFADIIAQCIQPEPEFRPPMSEVVEA 309
           SLVRWATPQLHDID+LAKMVD +LNGMYPAKSLSRFADIIA C+QPEPEFRPPMSEVV+A
Sbjct: 546 SLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQA 605

Query: 308 LVRLMQRASVVK-RSNDESGFTFRVPDQEILDTAF 207
           LVRL+QRASVVK RS+DESGF ++ PD E +D +F
Sbjct: 606 LVRLVQRASVVKRRSSDESGFGYKTPDHEAIDMSF 640


Top