BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033887
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4...   121   7e-26
ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4...   119   3e-25
ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7...   115   3e-24
ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago tr...   115   4e-24
gb|AAM65689.1| light-harvesting complex protein [Arabidopsis tha...   112   2e-23

>ref|XP_002284724.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|302142320|emb|CBI19523.3| unnamed protein
           product [Vitis vinifera]
          Length = 264

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/88 (70%), Positives = 68/88 (77%)
 Frame = -1

Query: 266 VETKRYMDFTNPGSQAKEGSFFGLEAAXXXXXXXXXXXXXXXXXXLAKDIKSANEWKLKE 87
           VETKRYMDFTNPGSQAKEGSFFGLEAA                  LA+DIK+A++WKLKE
Sbjct: 156 VETKRYMDFTNPGSQAKEGSFFGLEAALEGLEPGYPGGPLLNPLGLARDIKNAHDWKLKE 215

Query: 86  IKNGRLAMVAMLGFFVQAYVTHAGPVDN 3
           IKNGRLAMVAMLG FVQA VTHAGP++N
Sbjct: 216 IKNGRLAMVAMLGVFVQASVTHAGPIEN 243


>ref|XP_004150882.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic-like
           [Cucumis sativus] gi|449522610|ref|XP_004168319.1|
           PREDICTED: chlorophyll a-b binding protein 4,
           chloroplastic-like [Cucumis sativus]
          Length = 259

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/88 (67%), Positives = 67/88 (76%)
 Frame = -1

Query: 266 VETKRYMDFTNPGSQAKEGSFFGLEAAXXXXXXXXXXXXXXXXXXLAKDIKSANEWKLKE 87
           VETKRYMDF +PGSQA+EG+FFGLEAA                  +AKDIK+A++WKLKE
Sbjct: 150 VETKRYMDFKSPGSQAQEGTFFGLEAAFKGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKE 209

Query: 86  IKNGRLAMVAMLGFFVQAYVTHAGPVDN 3
           IKNGRLAMVAMLG FVQAYVTH GP+DN
Sbjct: 210 IKNGRLAMVAMLGIFVQAYVTHTGPIDN 237


>ref|XP_003528272.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           [Glycine max]
          Length = 263

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/88 (67%), Positives = 65/88 (73%)
 Frame = -1

Query: 266 VETKRYMDFTNPGSQAKEGSFFGLEAAXXXXXXXXXXXXXXXXXXLAKDIKSANEWKLKE 87
           VETKRYMDF +PGSQAKEGSFFGLEA+                  LAKDI +A++WKLKE
Sbjct: 154 VETKRYMDFVSPGSQAKEGSFFGLEASLKGLEPGYPGGPLLNPLGLAKDINNAHDWKLKE 213

Query: 86  IKNGRLAMVAMLGFFVQAYVTHAGPVDN 3
           IKNGRLAMVAMLG FVQA VTH GP+DN
Sbjct: 214 IKNGRLAMVAMLGIFVQASVTHVGPIDN 241


>ref|XP_003603038.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355492086|gb|AES73289.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 267

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/87 (67%), Positives = 64/87 (73%)
 Frame = -1

Query: 263 ETKRYMDFTNPGSQAKEGSFFGLEAAXXXXXXXXXXXXXXXXXXLAKDIKSANEWKLKEI 84
           ET+RYMDF +PGSQAKEGSFFGLEA+                  LAKDIKSA EWKLKEI
Sbjct: 159 ETRRYMDFVSPGSQAKEGSFFGLEASLGGLEPGYPGGPLLNPLGLAKDIKSAREWKLKEI 218

Query: 83  KNGRLAMVAMLGFFVQAYVTHAGPVDN 3
           KNGRLAMVA+LG FVQA VTH GP+DN
Sbjct: 219 KNGRLAMVAILGIFVQASVTHVGPIDN 245


>gb|AAM65689.1| light-harvesting complex protein [Arabidopsis thaliana]
          Length = 256

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/88 (65%), Positives = 66/88 (75%), Gaps = 1/88 (1%)
 Frame = -1

Query: 263 ETKRYMDFTNPGSQAKEGSFF-GLEAAXXXXXXXXXXXXXXXXXXLAKDIKSANEWKLKE 87
           ETKRYMDF +PGSQAKEGSFF G+EAA                  LAKD+K+A++WKLKE
Sbjct: 147 ETKRYMDFVSPGSQAKEGSFFFGIEAALEGLEPGYPGGPLLNPLGLAKDVKNAHDWKLKE 206

Query: 86  IKNGRLAMVAMLGFFVQAYVTHAGPVDN 3
           IKNGRLAM+AMLGFFVQA VTH GP+DN
Sbjct: 207 IKNGRLAMMAMLGFFVQASVTHTGPIDN 234