BLASTX nr result

ID: Coptis24_contig00033854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033854
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247...    84   2e-14
ref|XP_002307564.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002530206.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_003519537.1| PREDICTED: uncharacterized protein LOC100818...    73   3e-11
ref|XP_002300865.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_002283205.1| PREDICTED: uncharacterized protein LOC100247266 [Vitis vinifera]
           gi|302143518|emb|CBI22079.3| unnamed protein product
           [Vitis vinifera]
          Length = 505

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/80 (53%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
 Frame = +3

Query: 6   SSDHRSTEFPFRDIDG--KALKDEAKFLKACGTLLETPAEIRKTSEKAEGSPSHGGDYKN 179
           S D +S  F   + +   K LKDEA+FLKACGTL+ETPAEIRK S + + SPS  GD ++
Sbjct: 71  SKDRKSHVFGSSEPENIDKELKDEARFLKACGTLVETPAEIRKASRRLKSSPSQDGDLEH 130

Query: 180 SEFESWSPITPIRKLHLEDQ 239
           S+F SW P T I+KL L+ Q
Sbjct: 131 SKFHSWLPNTSIKKLQLDKQ 150


>ref|XP_002307564.1| predicted protein [Populus trichocarpa] gi|222857013|gb|EEE94560.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 48/94 (51%), Positives = 59/94 (62%)
 Frame = +3

Query: 54  KALKDEAKFLKACGTLLETPAEIRKTSEKAEGSPSHGGDYKNSEFESWSPITPIRKLHLE 233
           K L+DEAKFLKACGTL ETP EIRK  EK  GSP+   D + S+F SW P T I+KL L+
Sbjct: 55  KGLRDEAKFLKACGTLTETPIEIRKACEKFNGSPTLDKDSEPSKFHSWLPSTSIKKLQLD 114

Query: 234 DQSDCVPATADIHYEEPGHESGSPQVSVIRSIIS 335
           +Q+D  P T     EE G  S S + +   S I+
Sbjct: 115 NQTD-QPLTPVKLCEEWGKGSVSSEQTPSSSCIT 147


>ref|XP_002530206.1| conserved hypothetical protein [Ricinus communis]
           gi|223530282|gb|EEF32180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 461

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 42/81 (51%), Positives = 52/81 (64%)
 Frame = +3

Query: 54  KALKDEAKFLKACGTLLETPAEIRKTSEKAEGSPSHGGDYKNSEFESWSPITPIRKLHLE 233
           K L +EAKFLKACGTL ETP+EIRK SEK   SP  G + ++ +F SW P T I+KL L+
Sbjct: 70  KELANEAKFLKACGTLPETPSEIRKASEKLRVSPPAGKNSQSLDFHSWLPSTSIKKLQLD 129

Query: 234 DQSDCVPATADIHYEEPGHES 296
            + D  P    +  EE GH S
Sbjct: 130 KEIDQPPTPVKL-CEEWGHGS 149


>ref|XP_003519537.1| PREDICTED: uncharacterized protein LOC100818713 [Glycine max]
          Length = 452

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/64 (56%), Positives = 43/64 (67%)
 Frame = +3

Query: 48  DGKALKDEAKFLKACGTLLETPAEIRKTSEKAEGSPSHGGDYKNSEFESWSPITPIRKLH 227
           D + LKDEAKFLKACGTL  TP EIRK SEK + SP+   D ++S F  W P T + KL 
Sbjct: 89  DFQGLKDEAKFLKACGTLTGTPVEIRKASEKLKASPAPDKDSEHSRFHCWLPNTSVEKLQ 148

Query: 228 LEDQ 239
           L+ Q
Sbjct: 149 LDVQ 152


>ref|XP_002300865.1| predicted protein [Populus trichocarpa] gi|222842591|gb|EEE80138.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/64 (54%), Positives = 46/64 (71%)
 Frame = +3

Query: 54  KALKDEAKFLKACGTLLETPAEIRKTSEKAEGSPSHGGDYKNSEFESWSPITPIRKLHLE 233
           K L+DEAKFLKACGTL ETP EIRK  +K +GSP      ++S+F SW P T + KL L+
Sbjct: 86  KGLRDEAKFLKACGTLPETPTEIRKACDKFKGSPGLDKYSESSKFHSWLPNTSMEKLQLD 145

Query: 234 DQSD 245
           +Q++
Sbjct: 146 NQNE 149


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