BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033847
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624942.1| Pentatricopeptide repeat-containing protein ...   127   7e-28
gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]   127   7e-28
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]             124   6e-27
emb|CBI15196.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27

>ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499957|gb|AES81160.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  127 bits (320), Expect = 7e-28
 Identities = 54/91 (59%), Positives = 72/91 (79%)
 Frame = +1

Query: 1   VTMIAVLCACSHAGLVDEGRRCFDTMHQKFGIIPKLEHYGCIVDLLGRAGLLNEAYTFIE 180
           +T +++L ACSH+GLVDEG++CFD M +++GI P L+HYGC+VDLLGRAG L +AY  + 
Sbjct: 528 ITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVR 587

Query: 181 SMPLVPHTGVWGALLNACKIYGNVELAECAS 273
           +MP+ P   +WGALL+ACKIYGN EL   AS
Sbjct: 588 NMPIQPDASIWGALLSACKIYGNAELGTLAS 618


>gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  127 bits (320), Expect = 7e-28
 Identities = 54/91 (59%), Positives = 72/91 (79%)
 Frame = +1

Query: 1   VTMIAVLCACSHAGLVDEGRRCFDTMHQKFGIIPKLEHYGCIVDLLGRAGLLNEAYTFIE 180
           +T +++L ACSH+GLVDEG++CFD M +++GI P L+HYGC+VDLLGRAG L +AY  + 
Sbjct: 528 ITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVR 587

Query: 181 SMPLVPHTGVWGALLNACKIYGNVELAECAS 273
           +MP+ P   +WGALL+ACKIYGN EL   AS
Sbjct: 588 NMPIQPDASIWGALLSACKIYGNAELGTLAS 618


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/90 (63%), Positives = 69/90 (76%)
 Frame = +1

Query: 1   VTMIAVLCACSHAGLVDEGRRCFDTMHQKFGIIPKLEHYGCIVDLLGRAGLLNEAYTFIE 180
           VT   +LCACSH+GLVDEG+R FD M + +G++PK +HY C+VD+LGRAG L EA  FIE
Sbjct: 579 VTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIE 638

Query: 181 SMPLVPHTGVWGALLNACKIYGNVELAECA 270
            MPL P   VWGALL AC I+GN+ELAE A
Sbjct: 639 GMPLAPSASVWGALLGACCIHGNLELAEKA 668


>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +1

Query: 1   VTMIAVLCACSHAGLVDEGRRCFDTMHQKFGIIPKLEHYGCIVDLLGRAGLLNEAYTFIE 180
           +T I VLCACSHAG VD+GR  F+ M++K+GI+P++EHYGC+VDLL RAG L+EA+  IE
Sbjct: 274 ITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIE 333

Query: 181 SMPLVPHTGVWGALLNACKIYGNVELA 261
           SMP+ P+  VWGALL  C+I+ N ELA
Sbjct: 334 SMPMKPNDAVWGALLGGCRIHKNAELA 360


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/87 (62%), Positives = 70/87 (80%)
 Frame = +1

Query: 1   VTMIAVLCACSHAGLVDEGRRCFDTMHQKFGIIPKLEHYGCIVDLLGRAGLLNEAYTFIE 180
           +T I VLCACSHAG VD+GR  F+ M++K+GI+P++EHYGC+VDLL RAG L+EA+  IE
Sbjct: 360 ITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIE 419

Query: 181 SMPLVPHTGVWGALLNACKIYGNVELA 261
           SMP+ P+  VWGALL  C+I+ N ELA
Sbjct: 420 SMPMKPNDAVWGALLGGCRIHKNAELA 446