BLASTX nr result

ID: Coptis24_contig00033845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033845
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525065.1| protein phosphatase 2c, putative [Ricinus co...    84   9e-15
ref|XP_002315265.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
gb|ABK93230.1| unknown [Populus trichocarpa]                           83   3e-14
ref|XP_002312054.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|NP_001146390.1| uncharacterized protein LOC100279970 [Zea ma...    81   1e-13

>ref|XP_002525065.1| protein phosphatase 2c, putative [Ricinus communis]
           gi|223535646|gb|EEF37312.1| protein phosphatase 2c,
           putative [Ricinus communis]
          Length = 237

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -3

Query: 223 REMRYSDMKKIDRGVRRHFHDDITVIVLFLDSVPLSNSSFHSSTISVRGGGGLP 62
           REMRYSD+KKIDRGVRRHFHDDITVIVLFLDS  ++ SS     IS+RGG G+P
Sbjct: 179 REMRYSDLKKIDRGVRRHFHDDITVIVLFLDSHLINRSSCRGPLISIRGGNGIP 232


>ref|XP_002315265.1| predicted protein [Populus trichocarpa] gi|222864305|gb|EEF01436.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/53 (75%), Positives = 45/53 (84%)
 Frame = -3

Query: 223 REMRYSDMKKIDRGVRRHFHDDITVIVLFLDSVPLSNSSFHSSTISVRGGGGL 65
           REMRYSD+KKIDRGVRRHFHDDITVIVLFLDS  +S SSF    IS++GG G+
Sbjct: 328 REMRYSDLKKIDRGVRRHFHDDITVIVLFLDSNLVSRSSFRGPLISIKGGYGV 380


>gb|ABK93230.1| unknown [Populus trichocarpa]
          Length = 270

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/53 (75%), Positives = 45/53 (84%)
 Frame = -3

Query: 223 REMRYSDMKKIDRGVRRHFHDDITVIVLFLDSVPLSNSSFHSSTISVRGGGGL 65
           REMRYSD+KKIDRGVRRHFHDDITVIVLFLDS  +S SSF    IS++GG G+
Sbjct: 212 REMRYSDLKKIDRGVRRHFHDDITVIVLFLDSNLVSRSSFRGPLISIKGGYGV 264


>ref|XP_002312054.1| predicted protein [Populus trichocarpa] gi|222851874|gb|EEE89421.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/53 (73%), Positives = 45/53 (84%)
 Frame = -3

Query: 223 REMRYSDMKKIDRGVRRHFHDDITVIVLFLDSVPLSNSSFHSSTISVRGGGGL 65
           REMRYSD+K+IDRGVRRHFHDDITVIVLFLDS  +S SSF    IS++GG G+
Sbjct: 328 REMRYSDLKRIDRGVRRHFHDDITVIVLFLDSNLVSRSSFRGPLISIKGGCGV 380


>ref|NP_001146390.1| uncharacterized protein LOC100279970 [Zea mays]
           gi|219886979|gb|ACL53864.1| unknown [Zea mays]
           gi|224030587|gb|ACN34369.1| unknown [Zea mays]
           gi|413943100|gb|AFW75749.1| protein phosphatase 2C
           isoform 1 [Zea mays] gi|413943101|gb|AFW75750.1| protein
           phosphatase 2C isoform 2 [Zea mays]
           gi|413943102|gb|AFW75751.1| protein phosphatase 2C
           isoform 3 [Zea mays] gi|413943103|gb|AFW75752.1| protein
           phosphatase 2C isoform 4 [Zea mays]
          Length = 390

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/53 (75%), Positives = 46/53 (86%), Gaps = 1/53 (1%)
 Frame = -3

Query: 223 REMRYSDMKKIDRGVRRHFHDDITVIVLFLDSVPLSNSSFH-SSTISVRGGGG 68
           REMRYSD+KKIDRGVRRHFHDDITVIV+FLDS  +S +S H   T+S+RGGGG
Sbjct: 326 REMRYSDLKKIDRGVRRHFHDDITVIVVFLDSGLVSQASTHRGPTLSLRGGGG 378


Top