BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033817
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512927.1| hypothetical protein RCOM_1447640 [Ricinus c...    74   2e-11
ref|XP_002512931.1| conserved hypothetical protein [Ricinus comm...    72   4e-11
gb|ABX82527.1| S-locus F-box-like protein a [Petunia integrifoli...    72   4e-11
gb|ABR18786.1| class S F-box protein [Nicotiana alata]                 72   5e-11
dbj|BAJ24859.1| S-locus linked F-box protein type-3 [Petunia x h...    69   5e-10

>ref|XP_002512927.1| hypothetical protein RCOM_1447640 [Ricinus communis]
           gi|223547938|gb|EEF49430.1| hypothetical protein
           RCOM_1447640 [Ricinus communis]
          Length = 164

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
 Frame = +2

Query: 26  ILTFDFSNELLGTIPLPDVCSIRYDVGSQLDIISEKIACICRKFSPVSSDTEXXXXXXXX 205
           I++FDF +E+  T PLPD  S  Y   +    +SE +A +      +SSD          
Sbjct: 31  IVSFDFRDEIFKTSPLPDAVSTCYRFWTFF-CLSEYVALL------LSSDCSFGVEF--- 80

Query: 206 XXXXLDIWVLDEYGVKESWTKLYTIGPFSMFS-PMRFLKNGELILLANDQGLFLCNPLTQ 382
               +DIW++ EYGVKESWTKL+T+        P+ F +NGEL +      L + NP T+
Sbjct: 81  ----IDIWIIYEYGVKESWTKLFTVSSLPCVERPLGFWRNGELFMATWSGQLLIWNPGTE 136

Query: 383 EIKNIQVQGRP 415
            I   Q+ G P
Sbjct: 137 IITEFQIDGVP 147


>ref|XP_002512931.1| conserved hypothetical protein [Ricinus communis]
           gi|223547942|gb|EEF49434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
 Frame = +2

Query: 26  ILTFDFSNELLGTIPLPDVCSIRYDVGSQLDIISEKIACICRKFSPVSSDTEXXXXXXXX 205
           I++FD S+E+  T PLPD  S  +   +    +SE +  +      +SSD          
Sbjct: 253 IVSFDLSDEIFKTSPLPDAISTCFRFWTFF-CLSEYVTML------LSSDCSFGVEF--- 302

Query: 206 XXXXLDIWVLDEYGVKESWTKLYTIGPF-SMFSPMRFLKNGELILLANDQGLFLCNPLTQ 382
               +DIW++ EYGVKESWTKL+TI     +  P+ F +NGE+ +      L L NP T+
Sbjct: 303 ----IDIWIMYEYGVKESWTKLFTISSLPCVEKPLGFWRNGEVFMATWSGQLLLWNPATE 358

Query: 383 EIKNIQVQGRP 415
            I   Q+ G P
Sbjct: 359 TITEFQIDGLP 369


>gb|ABX82527.1| S-locus F-box-like protein a [Petunia integrifolia subsp. inflata]
          Length = 384

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
 Frame = +2

Query: 26  ILTFDFSNELLGTIPLPDVCSIRYDVGSQLDIISEKIACICRKFSPVSSDTEXXXXXXXX 205
           IL FD S E    + +PD C  +      L ++++ +A IC +      D          
Sbjct: 235 ILCFDISTETFRNMKMPDACHFKDRKSYGLVVLNDSLALICYRHPRCVIDPAKDF----- 289

Query: 206 XXXXLDIWVLDEYGVKESWTKLYTIGPFSMFSPMRFLKNGELILLANDQG-LFLCNPLTQ 382
               ++IW + EYGV ESW K YTI P S+ SP+   KN  L+L  +  G LF  +  + 
Sbjct: 290 ----MEIWTMKEYGVGESWIKKYTITPLSIESPLAVWKNHFLLLEYHRSGVLFSYDLNSD 345

Query: 383 EIKNIQVQGRPIQSQWLHVASYKE 454
           E+K + + G P   Q L V+ YKE
Sbjct: 346 EVKELNLHGWP---QSLRVSIYKE 366


>gb|ABR18786.1| class S F-box protein [Nicotiana alata]
          Length = 388

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 45/143 (31%), Positives = 70/143 (48%)
 Frame = +2

Query: 26  ILTFDFSNELLGTIPLPDVCSIRYDVGSQLDIISEKIACICRKFSPVSSDTEXXXXXXXX 205
           IL FDFS E+  ++ +P+ C+        L +++E +  IC      S D+E        
Sbjct: 245 ILCFDFSTEIFRSMKMPESCNAYDGKRYSLAVVNESLTLICYP----SPDSEIDQTQNT- 299

Query: 206 XXXXLDIWVLDEYGVKESWTKLYTIGPFSMFSPMRFLKNGELILLANDQGLFLCNPLTQE 385
               +DIW++ EYGV ESWTK Y I P  + SP+   ++  L+L +    L   N  + E
Sbjct: 300 ----MDIWIMMEYGVNESWTKKYIISPLPIESPLTIWRDHLLLLQSKTGQLISYNLRSNE 355

Query: 386 IKNIQVQGRPIQSQWLHVASYKE 454
           +K   ++G P   + L    YKE
Sbjct: 356 VKEFDLRGYP---ESLRAIVYKE 375


>dbj|BAJ24859.1| S-locus linked F-box protein type-3 [Petunia x hybrida]
          Length = 388

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 6/149 (4%)
 Frame = +2

Query: 26  ILTFDFSNELLGTIPLPDVCSIRYDVGSQLDIISEKIACIC-----RKFSPVSSDTEXXX 190
           +L FD + E+  T+ +P  C++R +    L +  E +  IC     R+ SP+    E   
Sbjct: 243 LLCFDINTEIFRTMQVPSTCAVRDEKCHSLVVFGECLTFICYPDPRRESSPMQETIE--- 299

Query: 191 XXXXXXXXXLDIWVLDEYGVKESWTKLYTIGPFSMFSPMRFLKNGELILLANDQGLFLCN 370
                      IW++ EY V ESW K YTI P  + SP+   K+  L+LL +  G+ +  
Sbjct: 300 -----------IWIMQEYSVNESWIKKYTIRPPPIESPLAIWKD-RLLLLQDKSGVLIAY 347

Query: 371 PLT-QEIKNIQVQGRPIQSQWLHVASYKE 454
            L   E+K  ++ G P   + L V  YKE
Sbjct: 348 DLNLDEVKEFKLHGHP---ESLRVIVYKE 373