BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033812
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]   110   2e-22
ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
emb|CAN68290.1| hypothetical protein VITISV_019715 [Vitis vinifera]   107   8e-22
emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   105   3e-21
emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]   104   9e-21

>emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/101 (51%), Positives = 71/101 (70%)
 Frame = -2

Query: 319 DRVHNRDVVSWTSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKR 140
           DR+  RDV+SW ++I+GYA VGK+  A+ LFD MPERNLVSWN ++SG+ KCG+V  A  
Sbjct: 90  DRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFG 149

Query: 139 VFVEMGVRDIVSWNSLISCYARNGFAEDAFGVLRDCLVEGV 17
           +F EM  RD+VSWNS+++CYA+ G   +A  +       GV
Sbjct: 150 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 190



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = -2

Query: 283 SLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKRVFVEMGVRDIVS 104
           SLI  YA    +G A++LF    +R++VSWN +I GY K G++   + VF  M  RD++S
Sbjct: 40  SLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCRDVIS 99

Query: 103 WNSLISCYARNGFAEDA 53
           WN++I+ YA  G  ++A
Sbjct: 100 WNTIINGYAIVGKIDEA 116


>ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/101 (50%), Positives = 71/101 (70%)
 Frame = -2

Query: 319 DRVHNRDVVSWTSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKR 140
           DR+  RDV+SW ++I+GYA VGK+  A+ LFD MPERNLVSWN +++G+ KCG+V  A  
Sbjct: 285 DRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFG 344

Query: 139 VFVEMGVRDIVSWNSLISCYARNGFAEDAFGVLRDCLVEGV 17
           +F EM  RD+VSWNS+++CYA+ G   +A  +       GV
Sbjct: 345 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGV 385



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/78 (41%), Positives = 50/78 (64%)
 Frame = -2

Query: 286 TSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKRVFVEMGVRDIV 107
           +SLI  YA    +G A++LF+    R++VSWN +I GY K  ++  A+ VF  M  RD++
Sbjct: 234 SSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVI 293

Query: 106 SWNSLISCYARNGFAEDA 53
           SWN++I+ YA  G  ++A
Sbjct: 294 SWNTMINGYAIVGKIDEA 311


>emb|CAN68290.1| hypothetical protein VITISV_019715 [Vitis vinifera]
          Length = 717

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/101 (49%), Positives = 70/101 (69%)
 Frame = -2

Query: 319 DRVHNRDVVSWTSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKR 140
           DR+  RDV+SW ++I+GYA VGK+  A+ LFD MPERNLVSWN +++G+ KCG+V  A  
Sbjct: 289 DRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFG 348

Query: 139 VFVEMGVRDIVSWNSLISCYARNGFAEDAFGVLRDCLVEGV 17
           +F EM  RD+VSWNS+++CYA+ G   +   +       GV
Sbjct: 349 LFSEMPCRDVVSWNSMLACYAQCGKPNEVLALFDQMRAVGV 389



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 43/91 (47%), Positives = 66/91 (72%)
 Frame = -2

Query: 307 NRDVVSWTSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKRVFVE 128
           +RD+VSW ++IDGY K G+MG A+ +FD M  R+++SWN +I+GY   G +  AKR+F E
Sbjct: 262 DRDLVSWNAMIDGYVKRGEMGHARIVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDE 321

Query: 127 MGVRDIVSWNSLISCYARNGFAEDAFGVLRD 35
           M  R++VSWNS+++ + + G  EDAFG+  +
Sbjct: 322 MPERNLVSWNSMLAGFVKCGNVEDAFGLFSE 352



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/78 (42%), Positives = 51/78 (65%)
 Frame = -2

Query: 286 TSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKRVFVEMGVRDIV 107
           +SLI  YA    +  A++LF+   +R+LVSWN +I GY K G++  A+ VF  M  RD++
Sbjct: 238 SSLIHLYANGKDLVAAKQLFNLCSDRDLVSWNAMIDGYVKRGEMGHARIVFDRMVCRDVI 297

Query: 106 SWNSLISCYARNGFAEDA 53
           SWN++I+ YA  G  ++A
Sbjct: 298 SWNTMINGYAIVGKIDEA 315


>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = -2

Query: 319 DRVHNRDVVSWTSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKR 140
           DR+ NRDVVSW S+I GY K G++ +A ELFD MPER+LVS N +I GYGKCG    A++
Sbjct: 168 DRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEK 227

Query: 139 VFVEMGVRDIVSWNSLISCYARNGFAEDAFGVLRDCLVEGV 17
           VF  M  +D+V+W S+IS Y +N     A  + R+ L  G+
Sbjct: 228 VFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGL 268



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
 Frame = -2

Query: 283 SLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKRVFVEMGVRDIVS 104
           S++  Y   G++ +A+ +FD MP R++VSWN +I+GY K G++  A  +F EM  RD+VS
Sbjct: 149 SMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVS 208

Query: 103 WNSLISCYARNG---FAEDAFGVLRD 35
            N++I  Y + G    AE  F  + D
Sbjct: 209 CNAMIDGYGKCGRCELAEKVFETMSD 234


>emb|CAN83751.1| hypothetical protein VITISV_040023 [Vitis vinifera]
          Length = 496

 Score =  104 bits (259), Expect = 9e-21
 Identities = 50/101 (49%), Positives = 69/101 (68%)
 Frame = -2

Query: 319 DRVHNRDVVSWTSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKR 140
           DR+  RDV+SW ++I+GYA VGK+  A+ LFD MPERNLVS N ++ G+ KCG+V  A  
Sbjct: 89  DRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSXNSMLXGFVKCGNVEDAFG 148

Query: 139 VFVEMGVRDIVSWNSLISCYARNGFAEDAFGVLRDCLVEGV 17
           +F EM  RD+VSWNS+++CYA+ G   +A  +       GV
Sbjct: 149 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMXAVGV 189



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/91 (46%), Positives = 64/91 (70%)
 Frame = -2

Query: 307 NRDVVSWTSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKRVFVE 128
           +RD+VSW ++IDGY K G+MG A+ +FD M  R+++SWN +I+GY   G +  AKR+F E
Sbjct: 62  DRDLVSWNAMIDGYVKRGEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDE 121

Query: 127 MGVRDIVSWNSLISCYARNGFAEDAFGVLRD 35
           M  R++VS NS++  + + G  EDAFG+  +
Sbjct: 122 MPERNLVSXNSMLXGFVKCGNVEDAFGLFSE 152



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/78 (43%), Positives = 52/78 (66%)
 Frame = -2

Query: 286 TSLIDGYAKVGKMGIAQELFDSMPERNLVSWNVLISGYGKCGDVPGAKRVFVEMGVRDIV 107
           +SLI  YA    +G A++LF+   +R+LVSWN +I GY K G++  A+ VF  M  RD++
Sbjct: 38  SSLIHLYANGKDLGAAKQLFNLCSDRDLVSWNAMIDGYVKRGEMGHARMVFDRMVCRDVI 97

Query: 106 SWNSLISCYARNGFAEDA 53
           SWN++I+ YA  G  ++A
Sbjct: 98  SWNTMINGYAIVGKIDEA 115