BLASTX nr result

ID: Coptis24_contig00033781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033781
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254...    74   2e-11
ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216...    65   8e-09
ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804...    58   1e-06

>ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|222854189|gb|EEE91736.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 53/117 (45%), Positives = 63/117 (53%)
 Frame = +3

Query: 114 MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 293
           M RK SKRVSFSPD+NDK  +F KH  GS              L+FRLP+TS+ S   + 
Sbjct: 1   MSRKASKRVSFSPDVNDKPTIFLKH--GSGTRVGGNRKKIAGTLTFRLPRTSKFSPA-RL 57

Query: 294 LDSLSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 464
           L SLS KVAR L                 ++ RSRS    VDS   EA+EDCIEF+N
Sbjct: 58  LRSLSAKVARVL-RFVSMRKESSHNVTSSSLPRSRSLAEAVDSQRAEAMEDCIEFLN 113


>ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|222867597|gb|EEF04728.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 51/117 (43%), Positives = 59/117 (50%)
 Frame = +3

Query: 114 MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 293
           M RK SKR+SFSPD NDK  +F KH  GS               SFRLP+TS+ S   + 
Sbjct: 1   MSRKASKRLSFSPDENDKPTIFLKH--GSGTRVGGSRKKIAGIFSFRLPRTSKFSPA-RL 57

Query: 294 LDSLSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 464
           L  L  KVAR L                 ++ RSRS    VDS   EAIEDCIEF+N
Sbjct: 58  LRRLGAKVARVL-RFVPMGRKSSRKVTSSSLPRSRSLAEAVDSQRAEAIEDCIEFLN 113


>ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254499 [Vitis vinifera]
           gi|147783058|emb|CAN62121.1| hypothetical protein
           VITISV_037026 [Vitis vinifera]
          Length = 129

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 48/117 (41%), Positives = 59/117 (50%)
 Frame = +3

Query: 114 MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 293
           M ++ SKRVSFSPD+NDK  M  KH  G                SFRLP++S  S   +F
Sbjct: 1   MSKRASKRVSFSPDVNDKPTMLLKH--GGCSRASGHRRRVAVIWSFRLPRSSSFSPA-RF 57

Query: 294 LDSLSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 464
           L  L  +V RAL                 ++ RSRS    +DSH  EAIEDCIEF+N
Sbjct: 58  LRRLGDRVVRALRFMSMRRRSSRRVSSS-SLTRSRSLVDPIDSHRAEAIEDCIEFLN 113


>ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216064 [Cucumis sativus]
           gi|449483470|ref|XP_004156601.1| PREDICTED:
           uncharacterized LOC101216064 [Cucumis sativus]
          Length = 123

 Score = 65.1 bits (157), Expect = 8e-09
 Identities = 44/117 (37%), Positives = 57/117 (48%)
 Frame = +3

Query: 114 MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 293
           M RK SKRVSFSPD+NDK  +  KH  G                SF L + +R   + +F
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGGDGGAGMW--------SFGLSRETRYLPV-RF 51

Query: 294 LDSLSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 464
           L SL  +V+ A+                    RSRS +  ++SH  EAIEDCIEF+N
Sbjct: 52  LQSLKNRVSEAIRFVSTRKSSRKVSSAS-TFTRSRSVSDSMESHRAEAIEDCIEFLN 107


>ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804764 [Glycine max]
          Length = 127

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
 Frame = +3

Query: 117 LRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLS----FRLPKTSRLSAM 284
           + + SKRV FSPD+NDK  +F K+  G               ++    FR    + LS  
Sbjct: 1   MSRKSKRVCFSPDVNDKPTLFLKYNGGGGNDKDNRVSRNGKRVTRPCTFRFSMDTNLSPA 60

Query: 285 NKFLDSLSTKVARALXXXXXXXXXXXXXXXXPNMGRSRSYTSQVDSHHTEAIEDCIEFIN 464
            KFL  L  KVA A+                  + RSRS +   DSH  E +EDCIEF++
Sbjct: 61  -KFLLQLGEKVASAIRNVSVRRRSSRKVSSS-TLVRSRSLSDLTDSHRAETVEDCIEFLH 118


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