BLASTX nr result

ID: Coptis24_contig00033771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033771
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]    80   2e-13
ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding pro...    73   3e-11
ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [S...    71   1e-10
gb|AFW67150.1| hypothetical protein ZEAMMB73_637389 [Zea mays]         69   4e-10
gb|ACN27672.1| unknown [Zea mays] gi|413932600|gb|AFW67151.1| hy...    69   4e-10

>gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
          Length = 244

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = -1

Query: 271 PFRDILCCSYGHPRHISRDCVGIAICHNCGRRGHQAYECRSGRMLDRGL 125
           PFRDI+C     P HISRDCVGI IC+ CG RGH AYEC SGR+LDRG+
Sbjct: 192 PFRDIICRVCNQPGHISRDCVGIVICNTCGGRGHMAYECPSGRLLDRGM 240


>ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
           gi|296086261|emb|CBI31702.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/46 (67%), Positives = 35/46 (76%)
 Frame = -1

Query: 271 PFRDILCCSYGHPRHISRDCVGIAICHNCGRRGHQAYECRSGRMLD 134
           PFRDI C + G P HISRDCV I IC+NCG RGHQ++EC S RM D
Sbjct: 187 PFRDITCHNCGQPGHISRDCVSIVICNNCGGRGHQSFECPSVRMFD 232


>ref|XP_002463628.1| hypothetical protein SORBIDRAFT_01g003240 [Sorghum bicolor]
           gi|241917482|gb|EER90626.1| hypothetical protein
           SORBIDRAFT_01g003240 [Sorghum bicolor]
          Length = 258

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 30/49 (61%), Positives = 34/49 (69%)
 Frame = -1

Query: 271 PFRDILCCSYGHPRHISRDCVGIAICHNCGRRGHQAYECRSGRMLDRGL 125
           PFRDILC   G P HISR+C+   IC  CG RGH +YEC S R+ DRGL
Sbjct: 207 PFRDILCRICGQPGHISRNCIATIICDTCGGRGHMSYECPSARIFDRGL 255


>gb|AFW67150.1| hypothetical protein ZEAMMB73_637389 [Zea mays]
          Length = 218

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -1

Query: 271 PFRDILCCSYGHPRHISRDCVGIAICHNCGRRGHQAYECRSGRMLDRG 128
           PFRDILC   G P HISR+C+   IC  CG RGH +YEC S R+ DRG
Sbjct: 167 PFRDILCRICGQPGHISRNCMATVICDTCGGRGHMSYECPSARIFDRG 214


>gb|ACN27672.1| unknown [Zea mays] gi|413932600|gb|AFW67151.1| hypothetical protein
           ZEAMMB73_637389 [Zea mays]
          Length = 256

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -1

Query: 271 PFRDILCCSYGHPRHISRDCVGIAICHNCGRRGHQAYECRSGRMLDRG 128
           PFRDILC   G P HISR+C+   IC  CG RGH +YEC S R+ DRG
Sbjct: 205 PFRDILCRICGQPGHISRNCMATVICDTCGGRGHMSYECPSARIFDRG 252


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