BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033756
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               165   4e-39
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   158   5e-37
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc...   155   3e-36
gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subc...   155   3e-36
gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japo...   155   3e-36

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/109 (69%), Positives = 89/109 (81%)
 Frame = -3

Query: 327  DIAYAVSRLSRYTHCPSQEHWSALERLAKYLRGTMNYGIRFRQTPPVIEGYCDANWISDS 148
            DIAYAV RLSR T CPSQ+HW AL RL KYLRGTM+Y I +   P V+EGY DANWISDS
Sbjct: 1076 DIAYAVGRLSRCTQCPSQDHWEALARLMKYLRGTMDYAIEYSGFPAVLEGYSDANWISDS 1135

Query: 147  HDIKCTSGYIFTLGGGAVAWKSSKQTLIARSTMESELIALDKASAEAEW 1
             + K TSGY+FTLGGGAV W+S++QT+IARSTMESE +AL+ A +EAEW
Sbjct: 1136 DETKSTSGYVFTLGGGAVTWRSARQTIIARSTMESEFVALEMAGSEAEW 1184


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  158 bits (399), Expect = 5e-37
 Identities = 70/109 (64%), Positives = 89/109 (81%)
 Frame = -3

Query: 327  DIAYAVSRLSRYTHCPSQEHWSALERLAKYLRGTMNYGIRFRQTPPVIEGYCDANWISDS 148
            DIAYAVSRLSRYTH P++ HW AL  L +YL+GT++Y + F + P V+EGYCDANW++D+
Sbjct: 920  DIAYAVSRLSRYTHNPNRYHWDALRHLLRYLKGTIDYCLHFNKFPVVLEGYCDANWVTDN 979

Query: 147  HDIKCTSGYIFTLGGGAVAWKSSKQTLIARSTMESELIALDKASAEAEW 1
             ++  TSGY+F LGGGA++WKS+KQT IARSTMESE IAL+ A  EAEW
Sbjct: 980  DEVNSTSGYVFLLGGGAISWKSTKQTCIARSTMESEFIALELAGQEAEW 1028


>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1448

 Score =  155 bits (392), Expect = 3e-36
 Identities = 69/109 (63%), Positives = 89/109 (81%)
 Frame = -3

Query: 327  DIAYAVSRLSRYTHCPSQEHWSALERLAKYLRGTMNYGIRFRQTPPVIEGYCDANWISDS 148
            DI++AVS+LSR+   P  +HW ALER+ +YL+GTM+YGI +   P V+EGY D+NWISD+
Sbjct: 1244 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1303

Query: 147  HDIKCTSGYIFTLGGGAVAWKSSKQTLIARSTMESELIALDKASAEAEW 1
             +IK TSGY+FTLGGGAV+WKS KQT++ RSTME+EL ALD A+ EAEW
Sbjct: 1304 DEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEW 1352


>gb|ABA96132.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1357

 Score =  155 bits (392), Expect = 3e-36
 Identities = 69/109 (63%), Positives = 89/109 (81%)
 Frame = -3

Query: 327  DIAYAVSRLSRYTHCPSQEHWSALERLAKYLRGTMNYGIRFRQTPPVIEGYCDANWISDS 148
            DI++AVS+LSR+   P  +HW ALER+ +YL+GTM+YGI +   P V+EGY D+NWISD+
Sbjct: 1153 DISFAVSKLSRFVSNPGDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 1212

Query: 147  HDIKCTSGYIFTLGGGAVAWKSSKQTLIARSTMESELIALDKASAEAEW 1
             +IK TSGY+FTLGGGAV+WKS KQT++ RSTME+EL ALD A+ EAEW
Sbjct: 1213 DEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEW 1261


>gb|EEE67150.1| hypothetical protein OsJ_24213 [Oryza sativa Japonica Group]
          Length = 1028

 Score =  155 bits (392), Expect = 3e-36
 Identities = 69/109 (63%), Positives = 89/109 (81%)
 Frame = -3

Query: 327  DIAYAVSRLSRYTHCPSQEHWSALERLAKYLRGTMNYGIRFRQTPPVIEGYCDANWISDS 148
            DI++AVS+LSR+   P  +HW ALER+ +YL+GTM+YGI +   P V+EGY D+NWISD+
Sbjct: 824  DISFAVSKLSRFVSNPEDDHWQALERVMRYLKGTMSYGIHYTGYPKVLEGYSDSNWISDA 883

Query: 147  HDIKCTSGYIFTLGGGAVAWKSSKQTLIARSTMESELIALDKASAEAEW 1
             +IK TSGY+FTLGGGAV+WKS KQT++ RSTME+EL ALD A+ EAEW
Sbjct: 884  DEIKATSGYVFTLGGGAVSWKSCKQTILTRSTMEAELTALDTATVEAEW 932