BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033739
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB60760.1| F19K23.6 gene product [Arabidopsis thaliana]            64   2e-08
ref|NP_176402.2| Mitochondrial transcription termination factor ...    64   2e-08
ref|XP_002888050.1| hypothetical protein ARALYDRAFT_893294 [Arab...    62   4e-08
ref|XP_002888054.1| hypothetical protein ARALYDRAFT_893298 [Arab...    60   2e-07
ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245...    60   2e-07

>gb|AAB60760.1| F19K23.6 gene product [Arabidopsis thaliana]
          Length = 827

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = +1

Query: 4   VLSKENVQSRVEFFTVKQNFELSDIAKNPVILALSLEKRIIPRCNVLEVLYSNGLIG 174
           +LS E V+ ++EF   K N+ L D+  NP +L  +LEKR +PRCNV+E L S  L+G
Sbjct: 741 ILSAETVKKKIEFVVKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLG 797


>ref|NP_176402.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|26450724|dbj|BAC42471.1|
           unknown protein [Arabidopsis thaliana]
           gi|28951041|gb|AAO63444.1| At1g62110 [Arabidopsis
           thaliana] gi|332195803|gb|AEE33924.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 462

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = +1

Query: 4   VLSKENVQSRVEFFTVKQNFELSDIAKNPVILALSLEKRIIPRCNVLEVLYSNGLIG 174
           +LS E V+ ++EF   K N+ L D+  NP +L  +LEKR +PRCNV+E L S  L+G
Sbjct: 358 ILSAETVKKKIEFVVKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLG 414


>ref|XP_002888050.1| hypothetical protein ARALYDRAFT_893294 [Arabidopsis lyrata subsp.
           lyrata] gi|297333891|gb|EFH64309.1| hypothetical protein
           ARALYDRAFT_893294 [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/61 (49%), Positives = 39/61 (63%)
 Frame = +1

Query: 1   FVLSKENVQSRVEFFTVKQNFELSDIAKNPVILALSLEKRIIPRCNVLEVLYSNGLIGRV 180
           F LS E V+ + EF   K  + L  +  NP  L  SL+KRI+PRCNV++ L S GLIGR+
Sbjct: 151 FGLSAETVEKKTEFLVKKIIWPLKSVVSNPAGLGYSLQKRIVPRCNVIKALMSKGLIGRL 210

Query: 181 N 183
           N
Sbjct: 211 N 211


>ref|XP_002888054.1| hypothetical protein ARALYDRAFT_893298 [Arabidopsis lyrata subsp.
           lyrata] gi|297333895|gb|EFH64313.1| hypothetical protein
           ARALYDRAFT_893298 [Arabidopsis lyrata subsp. lyrata]
          Length = 768

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/56 (46%), Positives = 37/56 (66%)
 Frame = +1

Query: 7   LSKENVQSRVEFFTVKQNFELSDIAKNPVILALSLEKRIIPRCNVLEVLYSNGLIG 174
           LS E V+ + EF   K N+ L  +  NP +L  ++EKRI+PRCNV++ L S GL+G
Sbjct: 309 LSAETVKKKTEFLVKKMNWPLKALVLNPAVLGYNMEKRIVPRCNVIKALMSKGLLG 364


>ref|XP_002276370.1| PREDICTED: uncharacterized protein LOC100245862 [Vitis vinifera]
          Length = 403

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/58 (50%), Positives = 44/58 (75%)
 Frame = +1

Query: 4   VLSKENVQSRVEFFTVKQNFELSDIAKNPVILALSLEKRIIPRCNVLEVLYSNGLIGR 177
           VLS++ + + ++F+  K  +E S IA+ PV+L+LSLEKRIIPR +V++VL S GLI +
Sbjct: 285 VLSEDKLMATMDFYVNKMGWESSFIARRPVLLSLSLEKRIIPRYSVVQVLLSKGLINK 342