BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033737
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45
emb|CBI37724.3| unnamed protein product [Vitis vinifera]              184   1e-44
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...   184   1e-44
ref|NP_178481.1| pentatricopeptide repeat-containing protein [Ar...   183   1e-44
ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi...   181   5e-44

>ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
            mitochondrial-like [Glycine max]
          Length = 854

 Score =  186 bits (473), Expect = 2e-45
 Identities = 84/120 (70%), Positives = 98/120 (81%)
 Frame = +1

Query: 1    VLGDESHPQIKTIYREMNHLIKRITEVGYTPDMNFVLHDLEGEQKEDSLRCHSEKLAIVL 180
            +LGD+SHPQI  I R++N  I R+   GY PD NFVL DLEGEQ+EDSLR HSEKLAIV 
Sbjct: 735  ILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYHSEKLAIVF 794

Query: 181  GLISLPKEKPIRIMKNLRICGDCHAFAKLATKTEIRYIVIRDPVRYHHFKDGICSCGDYW 360
            G++S PKEK IRI KNL+ICGDCH FAKL  + E R+IVIRDP+RYHHF+DG+CSCGDYW
Sbjct: 795  GIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDGVCSCGDYW 854


>emb|CBI37724.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  184 bits (466), Expect = 1e-44
 Identities = 82/120 (68%), Positives = 100/120 (83%)
 Frame = +1

Query: 1   VLGDESHPQIKTIYREMNHLIKRITEVGYTPDMNFVLHDLEGEQKEDSLRCHSEKLAIVL 180
           +LGD SHP+I+ I + +N LI+R+  VGY PD NFVL DLEGEQKEDSLR HSEKLAI+ 
Sbjct: 220 ILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMF 279

Query: 181 GLISLPKEKPIRIMKNLRICGDCHAFAKLATKTEIRYIVIRDPVRYHHFKDGICSCGDYW 360
           GL++L +EK +RI KNLRICGDCH FAK+ ++ E R IVIRDP+RYHHF+DG+CSCGDYW
Sbjct: 280 GLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 339


>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  184 bits (466), Expect = 1e-44
 Identities = 82/120 (68%), Positives = 100/120 (83%)
 Frame = +1

Query: 1   VLGDESHPQIKTIYREMNHLIKRITEVGYTPDMNFVLHDLEGEQKEDSLRCHSEKLAIVL 180
           +LGD SHP+I+ I + +N LI+R+  VGY PD NFVL DLEGEQKEDSLR HSEKLAI+ 
Sbjct: 504 ILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMF 563

Query: 181 GLISLPKEKPIRIMKNLRICGDCHAFAKLATKTEIRYIVIRDPVRYHHFKDGICSCGDYW 360
           GL++L +EK +RI KNLRICGDCH FAK+ ++ E R IVIRDP+RYHHF+DG+CSCGDYW
Sbjct: 564 GLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623


>ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
           gi|4582435|gb|AAD24821.1| putative selenium-binding
           protein [Arabidopsis thaliana]
           gi|330250668|gb|AEC05762.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  183 bits (465), Expect = 1e-44
 Identities = 83/120 (69%), Positives = 98/120 (81%)
 Frame = +1

Query: 1   VLGDESHPQIKTIYREMNHLIKRITEVGYTPDMNFVLHDLEGEQKEDSLRCHSEKLAIVL 180
           ++GD SHPQI  + +++N LI R+T +GY P+ NFVL DLEGEQ EDSLR HSEKLA+  
Sbjct: 511 IIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAF 570

Query: 181 GLISLPKEKPIRIMKNLRICGDCHAFAKLATKTEIRYIVIRDPVRYHHFKDGICSCGDYW 360
           GL++LP EK IRI KNLRICGDCH F KLA+K EIR IVIRDP+RYHHF+DG CSCGDYW
Sbjct: 571 GLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630


>ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
           gi|449475689|ref|XP_004154524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  181 bits (460), Expect = 5e-44
 Identities = 82/120 (68%), Positives = 98/120 (81%)
 Frame = +1

Query: 1   VLGDESHPQIKTIYREMNHLIKRITEVGYTPDMNFVLHDLEGEQKEDSLRCHSEKLAIVL 180
           +LGD SHP+I+ I RE++ LI+R+  +GY PD NFVL DLEGEQ EDSL+ HSEKLAIV 
Sbjct: 467 ILGDNSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVF 526

Query: 181 GLISLPKEKPIRIMKNLRICGDCHAFAKLATKTEIRYIVIRDPVRYHHFKDGICSCGDYW 360
           GL+SLP +K I I KNLRICGDCH FAKL ++ E R IVIRDP+RYHHF+ G+CSCGDYW
Sbjct: 527 GLMSLPNQKTIHIRKNLRICGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586