BLASTX nr result

ID: Coptis24_contig00033709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033709
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAZ40333.1| hypothetical protein [Raphanus sativus]                63   2e-08

>emb|CAZ40333.1| hypothetical protein [Raphanus sativus]
          Length = 785

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
 Frame = +1

Query: 196 IQSAAQKHLVDSNSKYKVATDKHRQVVNFEAGDF------KDRAPAGDYNRLGLHKIGPF 357
           +   AQ HL  + +KYK+A D  R  + FE GD       K+R P  DYN+L   K+GP 
Sbjct: 669 VHKLAQSHLESATTKYKLAADTKRCELIFEPGDLVWVYLTKERLPLRDYNKLKSKKLGPV 728

Query: 358 EVIRKINPNAYK 393
           EV+ +INPN Y+
Sbjct: 729 EVVERINPNVYR 740


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