BLASTX nr result

ID: Coptis24_contig00033687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033687
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28293.3| unnamed protein product [Vitis vinifera]              134   1e-29
ref|XP_002274253.1| PREDICTED: NAC domain-containing protein 90-...   132   3e-29
emb|CAN67384.1| hypothetical protein VITISV_038299 [Vitis vinifera]   132   3e-29
emb|CBI30331.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002276192.1| PREDICTED: NAC domain-containing protein 90 ...   130   1e-28

>emb|CBI28293.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  134 bits (336), Expect = 1e-29
 Identities = 68/126 (53%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
 Frame = -1

Query: 393 TNSGYWKATGSPGFVYSN-NRIIGVKKTMVFYKGKAPSGSKTNWKMVEYKATEGEVYVNA 217
           T SGYWKATGSP +VYS+ NR+IGVKKTMVFYKGKAP+G KT WKM EY+A E +     
Sbjct: 86  TESGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPAGRKTKWKMHEYRAIETDTTTLN 145

Query: 216 SNYSTEMLRHEFSVCRVYVNSGCLRAFDRRPSGPTTTDTTNGQAQENVASTSDQSSLNTS 37
           S  +   LRHEF++ RVYV SG  RAFDRRP G    + T+ Q  + +  TS     + S
Sbjct: 146 STTAIPKLRHEFTLSRVYVVSGSFRAFDRRPLGTVVREETSQQDTQIMEKTSSSPESSCS 205

Query: 36  PGNDVH 19
            G+ +H
Sbjct: 206 GGDHLH 211


>ref|XP_002274253.1| PREDICTED: NAC domain-containing protein 90-like [Vitis vinifera]
          Length = 251

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/115 (57%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
 Frame = -1

Query: 393 TNSGYWKATGSPGFVYSN-NRIIGVKKTMVFYKGKAPSGSKTNWKMVEYKATEGEVYVNA 217
           T SGYWKATGSP +VYS+ NR+IGVKKTMVFYKGKAP+G KT WKM EY+A E +     
Sbjct: 86  TESGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPAGRKTKWKMHEYRAIETDTTTLN 145

Query: 216 SNYSTEMLRHEFSVCRVYVNSGCLRAFDRRPSGPTTTDTTNGQAQENVASTSDQS 52
           S  +   LRHEF++ RVYV SG  RAFDRRP G    + T+ Q Q++ A+ +  S
Sbjct: 146 STTAIPKLRHEFTLSRVYVVSGSFRAFDRRPLGTVVREETSQQVQQHAAAAAVSS 200


>emb|CAN67384.1| hypothetical protein VITISV_038299 [Vitis vinifera]
          Length = 237

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/115 (57%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
 Frame = -1

Query: 393 TNSGYWKATGSPGFVYSN-NRIIGVKKTMVFYKGKAPSGSKTNWKMVEYKATEGEVYVNA 217
           T SGYWKATGSP +VYS+ NR+IGVKKTMVFYKGKAP+G KT WKM EY+A E +     
Sbjct: 70  TESGYWKATGSPSYVYSSDNRVIGVKKTMVFYKGKAPAGRKTKWKMHEYRAIETDTTTLN 129

Query: 216 SNYSTEMLRHEFSVCRVYVNSGCLRAFDRRPSGPTTTDTTNGQAQENVASTSDQS 52
           S  +   LRHEF++ RVYV SG  RAFDRRP G    + T+ Q Q++ A+ +  S
Sbjct: 130 STTAIPKLRHEFTLSRVYVVSGSFRAFDRRPLGTVVREETSQQVQQHAAAAAVSS 184


>emb|CBI30331.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/116 (57%), Positives = 84/116 (72%), Gaps = 4/116 (3%)
 Frame = -1

Query: 396 ITNSGYWKATGSPGFVYS---NNRIIGVKKTMVFYKGKAPSGSKTNWKMVEYKATEGEVY 226
           +T SGYWKATGSPG VYS   N+RIIG K+TMV+Y+G+AP G KT WKM EYKA +GE  
Sbjct: 51  LTTSGYWKATGSPGHVYSSGQNSRIIGGKRTMVYYEGRAPHGRKTEWKMNEYKAIDGE-- 108

Query: 225 VNASNYSTEMLRHEFSVCRVYVNSGCLRAFDRRPSGPTTTDTTNGQAQ-ENVASTS 61
              SN +   LR EFS+CRVY+ + CLRAFDRRPSG    +  +G+A+ +  A+TS
Sbjct: 109 AATSNTANPPLRQEFSLCRVYMKTKCLRAFDRRPSGALGREAASGRARGDEAAATS 164


>ref|XP_002276192.1| PREDICTED: NAC domain-containing protein 90 [Vitis vinifera]
          Length = 253

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/116 (57%), Positives = 84/116 (72%), Gaps = 4/116 (3%)
 Frame = -1

Query: 396 ITNSGYWKATGSPGFVYS---NNRIIGVKKTMVFYKGKAPSGSKTNWKMVEYKATEGEVY 226
           +T SGYWKATGSPG VYS   N+RIIG K+TMV+Y+G+AP G KT WKM EYKA +GE  
Sbjct: 87  LTTSGYWKATGSPGHVYSSGQNSRIIGGKRTMVYYEGRAPHGRKTEWKMNEYKAIDGE-- 144

Query: 225 VNASNYSTEMLRHEFSVCRVYVNSGCLRAFDRRPSGPTTTDTTNGQAQ-ENVASTS 61
              SN +   LR EFS+CRVY+ + CLRAFDRRPSG    +  +G+A+ +  A+TS
Sbjct: 145 AATSNTANPPLRQEFSLCRVYMKTKCLRAFDRRPSGALGREAASGRARGDEAAATS 200


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