BLASTX nr result

ID: Coptis24_contig00033674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033674
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525009.1| PREDICTED: uncharacterized protein LOC100815...    57   1e-06
gb|ACU21205.1| unknown [Glycine max]                                   57   1e-06
ref|XP_002283312.1| PREDICTED: probable kinetochore protein NUF2...    55   8e-06
emb|CAN82250.1| hypothetical protein VITISV_036492 [Vitis vinifera]    55   8e-06

>ref|XP_003525009.1| PREDICTED: uncharacterized protein LOC100815227 [Glycine max]
          Length = 461

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = -2

Query: 181 MAASSYSFPVLTRKEIATVLLESQLAENITEQNLINPTPELVTKLYTNLLSNLDPLQGDD 2
           MA S+Y +P L R EI T+L + Q+A N+TEQ+  NP P+ ++ LYT +L +LD L  +D
Sbjct: 1   MAESNYEYPRLRRPEIVTILAQLQIA-NVTEQDFTNPNPDFISDLYTRVLIHLDILLEED 59


>gb|ACU21205.1| unknown [Glycine max]
          Length = 297

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/60 (46%), Positives = 41/60 (68%)
 Frame = -2

Query: 181 MAASSYSFPVLTRKEIATVLLESQLAENITEQNLINPTPELVTKLYTNLLSNLDPLQGDD 2
           MA S+Y +P L R EI T+L + Q+A N+TEQ+  NP P+ ++ LYT +L +LD L  +D
Sbjct: 1   MAESNYEYPRLRRPEIVTILAQLQIA-NVTEQDFTNPNPDFISDLYTRVLIHLDILLEED 59


>ref|XP_002283312.1| PREDICTED: probable kinetochore protein NUF2 [Vitis vinifera]
           gi|296082133|emb|CBI21138.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/56 (48%), Positives = 38/56 (67%)
 Frame = -2

Query: 172 SSYSFPVLTRKEIATVLLESQLAENITEQNLINPTPELVTKLYTNLLSNLDPLQGD 5
           S + +P+L R +I  +L ES++A  + E NLINP P+ V+ LYT LL +LD LQ D
Sbjct: 2   SKFEYPMLPRSDIIAILNESKIA-TVYEDNLINPNPDFVSDLYTRLLIHLDSLQED 56


>emb|CAN82250.1| hypothetical protein VITISV_036492 [Vitis vinifera]
          Length = 473

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/56 (48%), Positives = 38/56 (67%)
 Frame = -2

Query: 172 SSYSFPVLTRKEIATVLLESQLAENITEQNLINPTPELVTKLYTNLLSNLDPLQGD 5
           S + +P+L R +I  +L ES++A  + E NLINP P+ V+ LYT LL +LD LQ D
Sbjct: 2   SKFEYPMLPRSDIIAILNESKIA-TVYEDNLINPNPDFVSDLYTRLLIHLDSLQED 56


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