BLASTX nr result

ID: Coptis24_contig00033655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033655
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26780.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|NP_001173338.1| Os03g0237900 [Oryza sativa Japonica Group] g...   107   8e-22
gb|EAY89185.1| hypothetical protein OsI_10681 [Oryza sativa Indi...   107   1e-21
ref|XP_003589751.1| Cyclin-J18-like protein [Medicago truncatula...   106   2e-21
ref|XP_002521914.1| conserved hypothetical protein [Ricinus comm...   105   5e-21

>emb|CBI26780.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  110 bits (276), Expect = 9e-23
 Identities = 62/109 (56%), Positives = 78/109 (71%)
 Frame = +1

Query: 10  LEFLIRSSLHLGVSPIVKYTSLSLFAERFLPSLNNNKFIVKNSRTTTNWLFFLQLPLREC 189
           L FLI+S+  L V+PIVKYTSLSLFA+RF P L      +   + T +WL     P+RE 
Sbjct: 15  LAFLIQSAHRLEVTPIVKYTSLSLFADRFYPCLPR----LMQVKHTGSWLL---QPMRES 67

Query: 190 NIQLFALISIWISTKIHNTCTLSVMRLKSLGDKAIRDQHFTKRDFIEAV 336
           ++QLFALISIWIS+KIH++  LS+  LKSLGD  I +QHFT RDF+EAV
Sbjct: 68  HLQLFALISIWISSKIHDSRPLSMKSLKSLGDGIINEQHFTTRDFLEAV 116


>ref|NP_001173338.1| Os03g0237900 [Oryza sativa Japonica Group]
           gi|147637362|sp|Q0DTM7.2|CCJ18_ORYSJ RecName:
           Full=Cyclin-J18-like gi|27357985|gb|AAO06977.1|
           Hypothetical protein [Oryza sativa Japonica Group]
           gi|108707066|gb|ABF94861.1| cyclin J18, putative [Oryza
           sativa Japonica Group] gi|125585543|gb|EAZ26207.1|
           hypothetical protein OsJ_10074 [Oryza sativa Japonica
           Group] gi|255674352|dbj|BAH92066.1| Os03g0237900 [Oryza
           sativa Japonica Group]
          Length = 261

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   REALEFLIRSSLHLGVSPIVKYTSLSLFAERFLPSLNNNKFI--VKNSRTTTNWLFFLQL 174
           R  +EFL+ +S  L + P+VKYT+LS FA+R LPSL         +  R  T+WL     
Sbjct: 21  RRLIEFLLHASTRLDLRPVVKYTALSFFADRLLPSLRRKMGFCGARGGRAVTSWLLE--- 77

Query: 175 PLRECNIQLFALISIWISTKIHNTCTLSVMRLKSLGDKAIRDQHFTKRDFIEA 333
           PLR+ N++LFAL+++WI++KIH    LSV  LK+LGD+ I DQHFT RDF  A
Sbjct: 78  PLRDSNLELFALVAVWIASKIHELKPLSVKSLKALGDRIIADQHFTCRDFANA 130


>gb|EAY89185.1| hypothetical protein OsI_10681 [Oryza sativa Indica Group]
          Length = 261

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/113 (48%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
 Frame = +1

Query: 1   REALEFLIRSSLHLGVSPIVKYTSLSLFAERFLPSLNNNKFI--VKNSRTTTNWLFFLQL 174
           R  +EFL+ +S  L + P+VKYT+LS FA+R LPSL         +  R  T+WL     
Sbjct: 21  RRLIEFLLHASTRLDLRPVVKYTALSFFADRLLPSLPRKMGFCGARGGRAVTSWLLE--- 77

Query: 175 PLRECNIQLFALISIWISTKIHNTCTLSVMRLKSLGDKAIRDQHFTKRDFIEA 333
           PLR+ N++LFAL+++WI++KIH    LSV  LK+LGD+ I DQHFT RDF  A
Sbjct: 78  PLRDSNLELFALVAVWIASKIHELKPLSVKSLKALGDRIIADQHFTCRDFANA 130


>ref|XP_003589751.1| Cyclin-J18-like protein [Medicago truncatula]
           gi|355478799|gb|AES60002.1| Cyclin-J18-like protein
           [Medicago truncatula]
          Length = 231

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/120 (50%), Positives = 82/120 (68%)
 Frame = +1

Query: 10  LEFLIRSSLHLGVSPIVKYTSLSLFAERFLPSLNNNKFIVKNSRTTTNWLFFLQLPLREC 189
           +EFLI+S+ HL VSPIVKY++ S FA+RF  SL    FI + S  +++WL     P+ E 
Sbjct: 14  VEFLIKSAQHLQVSPIVKYSAFSFFADRFFSSLPT--FIQRGS--SSSWLL---KPVTES 66

Query: 190 NIQLFALISIWISTKIHNTCTLSVMRLKSLGDKAIRDQHFTKRDFIEAVCGFNFYYHFSL 369
            +QLF LIS+WISTKIH+   LSV  LK+L DK+I++QHFT R+F+EA   F    +F +
Sbjct: 67  TLQLFVLISLWISTKIHDLKPLSVASLKALADKSIKEQHFTNRNFLEAEVLFMQVLNFEI 126


>ref|XP_002521914.1| conserved hypothetical protein [Ricinus communis]
           gi|223538952|gb|EEF40550.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 241

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/114 (52%), Positives = 82/114 (71%), Gaps = 1/114 (0%)
 Frame = +1

Query: 7   ALEFLIRSSLHLG-VSPIVKYTSLSLFAERFLPSLNNNKFIVKNSRTTTNWLFFLQLPLR 183
           A+EFLI S+  L  VSPIVKYT+LSLFA+RF PSL+  +F+ + ++ +  WL      + 
Sbjct: 15  AVEFLIESAHELEEVSPIVKYTALSLFADRFYPSLS--RFVGQQNKGS--WLL---QSMT 67

Query: 184 ECNIQLFALISIWISTKIHNTCTLSVMRLKSLGDKAIRDQHFTKRDFIEAVCGF 345
           E N+QLFALIS+W+S+KIH++  LSV  LK   DK I++QHFT RDF+EA+  F
Sbjct: 68  ESNLQLFALISLWVSSKIHDSRPLSVKSLKIFSDKTIKEQHFTARDFLEAILIF 121


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