BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033643
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vi...   326   1e-87
emb|CBI16435.3| unnamed protein product [Vitis vinifera]              326   1e-87
ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   320   1e-85
ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   312   2e-83
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...   312   2e-83

>ref|XP_002283111.2| PREDICTED: DNA topoisomerase 6 subunit B [Vitis vinifera]
          Length = 656

 Score =  326 bits (835), Expect = 1e-87
 Identities = 157/174 (90%), Positives = 166/174 (95%)
 Frame = -2

Query: 524 GLPIEISSSMKGQKYTTFCRLDIDIHRNIPHIHLHEKRDNKEQWHGAEIQVVIEGNWTTY 345
           GLPIEISSSMKGQ Y +FCRLDIDIHRNIPHIHLHEKRDNKE+W GAEIQVVIEGNWTTY
Sbjct: 212 GLPIEISSSMKGQSYISFCRLDIDIHRNIPHIHLHEKRDNKERWCGAEIQVVIEGNWTTY 271

Query: 344 RSKILHYMRQMAVITPYAQFLFRFVSDAVDKNVTIRFARRTDVMPPIPVETKYHPSAVDL 165
           RSKILHYMRQMAVITPYAQFLF+FVSD  DKNVTIRFARRTD+MPP+P ETKYHPSAVDL
Sbjct: 272 RSKILHYMRQMAVITPYAQFLFKFVSDTSDKNVTIRFARRTDIMPPVPAETKYHPSAVDL 331

Query: 164 LLIKRLIAETSKQNLLQFLQHEFINIGKSYAQRLIEEMGPDFSPKTAVKSLTSQ 3
           LLIKRLI+ETSK+NLLQFLQHEF+NIGKSYA+RLI EMGPDFSPK AVKSLTSQ
Sbjct: 332 LLIKRLISETSKENLLQFLQHEFVNIGKSYAERLIGEMGPDFSPKMAVKSLTSQ 385


>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score =  326 bits (835), Expect = 1e-87
 Identities = 157/174 (90%), Positives = 166/174 (95%)
 Frame = -2

Query: 524 GLPIEISSSMKGQKYTTFCRLDIDIHRNIPHIHLHEKRDNKEQWHGAEIQVVIEGNWTTY 345
           GLPIEISSSMKGQ Y +FCRLDIDIHRNIPHIHLHEKRDNKE+W GAEIQVVIEGNWTTY
Sbjct: 212 GLPIEISSSMKGQSYISFCRLDIDIHRNIPHIHLHEKRDNKERWCGAEIQVVIEGNWTTY 271

Query: 344 RSKILHYMRQMAVITPYAQFLFRFVSDAVDKNVTIRFARRTDVMPPIPVETKYHPSAVDL 165
           RSKILHYMRQMAVITPYAQFLF+FVSD  DKNVTIRFARRTD+MPP+P ETKYHPSAVDL
Sbjct: 272 RSKILHYMRQMAVITPYAQFLFKFVSDTSDKNVTIRFARRTDIMPPVPAETKYHPSAVDL 331

Query: 164 LLIKRLIAETSKQNLLQFLQHEFINIGKSYAQRLIEEMGPDFSPKTAVKSLTSQ 3
           LLIKRLI+ETSK+NLLQFLQHEF+NIGKSYA+RLI EMGPDFSPK AVKSLTSQ
Sbjct: 332 LLIKRLISETSKENLLQFLQHEFVNIGKSYAERLIGEMGPDFSPKMAVKSLTSQ 385


>ref|XP_004142138.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Cucumis sativus]
           gi|449525918|ref|XP_004169963.1| PREDICTED: DNA
           topoisomerase 6 subunit B-like [Cucumis sativus]
          Length = 696

 Score =  320 bits (819), Expect = 1e-85
 Identities = 152/174 (87%), Positives = 166/174 (95%)
 Frame = -2

Query: 524 GLPIEISSSMKGQKYTTFCRLDIDIHRNIPHIHLHEKRDNKEQWHGAEIQVVIEGNWTTY 345
           GLPIEISSSMKGQ YT+FCRLDIDIHRNIPHIH+ EKRDNK+ WHGAEIQVVIEGNWTTY
Sbjct: 212 GLPIEISSSMKGQNYTSFCRLDIDIHRNIPHIHIQEKRDNKDLWHGAEIQVVIEGNWTTY 271

Query: 344 RSKILHYMRQMAVITPYAQFLFRFVSDAVDKNVTIRFARRTDVMPPIPVETKYHPSAVDL 165
           RSKILHYMRQMAVITPYAQFLFRFVSD  DKN+TIRF+RRTDVMPP+P+ETK+HPSAVDL
Sbjct: 272 RSKILHYMRQMAVITPYAQFLFRFVSDTPDKNITIRFSRRTDVMPPVPLETKHHPSAVDL 331

Query: 164 LLIKRLIAETSKQNLLQFLQHEFINIGKSYAQRLIEEMGPDFSPKTAVKSLTSQ 3
           LLIKRLIAET+KQNLLQFLQHEF+NIGK +A+RLI EMGP+FSPK +VKSLTSQ
Sbjct: 332 LLIKRLIAETAKQNLLQFLQHEFVNIGKPFAERLIGEMGPEFSPKMSVKSLTSQ 385


>ref|XP_003543556.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 2 [Glycine
           max]
          Length = 656

 Score =  312 bits (800), Expect = 2e-83
 Identities = 150/174 (86%), Positives = 162/174 (93%)
 Frame = -2

Query: 524 GLPIEISSSMKGQKYTTFCRLDIDIHRNIPHIHLHEKRDNKEQWHGAEIQVVIEGNWTTY 345
           GLPIEI+SSMK Q Y +FCRLDIDIH+NIPH+HLHEKR+NKE W GAEIQVVIEGNWTTY
Sbjct: 212 GLPIEITSSMKNQNYVSFCRLDIDIHKNIPHVHLHEKRENKEHWRGAEIQVVIEGNWTTY 271

Query: 344 RSKILHYMRQMAVITPYAQFLFRFVSDAVDKNVTIRFARRTDVMPPIPVETKYHPSAVDL 165
           RSKILHYMRQMAVITPYAQFLF+FVSDA DKNV+IRFARRTDVMPPIP+ETK+HPS+VDL
Sbjct: 272 RSKILHYMRQMAVITPYAQFLFKFVSDAPDKNVSIRFARRTDVMPPIPMETKHHPSSVDL 331

Query: 164 LLIKRLIAETSKQNLLQFLQHEFINIGKSYAQRLIEEMGPDFSPKTAVKSLTSQ 3
           LLIKRLIAETSKQNLLQFLQHEF+NI KSYA+RLI EMGPDF  K  VKSLTSQ
Sbjct: 332 LLIKRLIAETSKQNLLQFLQHEFVNISKSYAERLIGEMGPDFGSKMTVKSLTSQ 385


>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine
           max]
          Length = 673

 Score =  312 bits (800), Expect = 2e-83
 Identities = 150/174 (86%), Positives = 162/174 (93%)
 Frame = -2

Query: 524 GLPIEISSSMKGQKYTTFCRLDIDIHRNIPHIHLHEKRDNKEQWHGAEIQVVIEGNWTTY 345
           GLPIEI+SSMK Q Y +FCRLDIDIH+NIPH+HLHEKR+NKE W GAEIQVVIEGNWTTY
Sbjct: 212 GLPIEITSSMKNQNYVSFCRLDIDIHKNIPHVHLHEKRENKEHWRGAEIQVVIEGNWTTY 271

Query: 344 RSKILHYMRQMAVITPYAQFLFRFVSDAVDKNVTIRFARRTDVMPPIPVETKYHPSAVDL 165
           RSKILHYMRQMAVITPYAQFLF+FVSDA DKNV+IRFARRTDVMPPIP+ETK+HPS+VDL
Sbjct: 272 RSKILHYMRQMAVITPYAQFLFKFVSDAPDKNVSIRFARRTDVMPPIPMETKHHPSSVDL 331

Query: 164 LLIKRLIAETSKQNLLQFLQHEFINIGKSYAQRLIEEMGPDFSPKTAVKSLTSQ 3
           LLIKRLIAETSKQNLLQFLQHEF+NI KSYA+RLI EMGPDF  K  VKSLTSQ
Sbjct: 332 LLIKRLIAETSKQNLLQFLQHEFVNISKSYAERLIGEMGPDFGSKMTVKSLTSQ 385