BLASTX nr result

ID: Coptis24_contig00033639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033639
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36804.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_002319016.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par...   163   1e-38
ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   163   1e-38
ref|XP_003626277.1| DNA polymerase [Medicago truncatula] gi|3555...   162   3e-38

>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  175 bits (443), Expect = 4e-42
 Identities = 89/135 (65%), Positives = 106/135 (78%), Gaps = 1/135 (0%)
 Frame = -3

Query: 403 MENISQPDYNTLFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQK 224
           MEN SQ D   +FSVRIVS+DYYM+PPI DLDI YS+FQG  V EVPVIRIYGSTP GQK
Sbjct: 1   MEN-SQDDAK-IFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQK 58

Query: 223 TCLHIHRALPYLYVPCSSSI-QSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGC 47
           TCLH+HRALPYLYVPC+  + QS ++ + Y   ++  +EKAL  K+K ++G KRQHVHGC
Sbjct: 59  TCLHVHRALPYLYVPCTDLMPQSPQEADTYTHAVSLGVEKAL--KLKGNAGSKRQHVHGC 116

Query: 46  SLVRAKKFYGYYKPE 2
           SLVRAK FYGY+  E
Sbjct: 117 SLVRAKNFYGYHSSE 131


>ref|XP_002319016.1| predicted protein [Populus trichocarpa] gi|222857392|gb|EEE94939.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score =  170 bits (430), Expect = 1e-40
 Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 2/132 (1%)
 Frame = -3

Query: 391 SQP-DYNTLFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQKTCL 215
           SQP D + +FS+RIVSID+YMSPPI  +DI YS+FQG KVNEVPVIR+YGSTPAGQKTCL
Sbjct: 3   SQPADSSKIFSLRIVSIDHYMSPPIPGVDICYSSFQGGKVNEVPVIRVYGSTPAGQKTCL 62

Query: 214 HIHRALPYLYVPC-SSSIQSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGCSLV 38
           H+HRA PYLYVPC    I  + +G  Y R+I +++   + + +K + G KRQHVHGCSLV
Sbjct: 63  HVHRAFPYLYVPCLDIPINGNREGMIYDRNIFSSL--CITINLKGNVGSKRQHVHGCSLV 120

Query: 37  RAKKFYGYYKPE 2
           RAKKFYGY+  E
Sbjct: 121 RAKKFYGYHSDE 132


>ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus]
          Length = 1591

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/127 (64%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
 Frame = -3

Query: 370 LFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQKTCLHIHRALPY 191
           +FSVRIVSIDYY++PPI  LDISYS+FQG KVNEVPV+RIYGSTPAGQKTC+H+H  LPY
Sbjct: 10  VFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHGVLPY 69

Query: 190 LYVPCSSSI----QSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGCSLVRAKKF 23
           LYVPCS  +         GE    +++ A+EKAL  K+K +SG KRQHVHG +LVRAKK 
Sbjct: 70  LYVPCSEILLPLNDKGVGGEALGNNVSLALEKAL--KLKGNSGSKRQHVHGYNLVRAKKL 127

Query: 22  YGYYKPE 2
           YGY+  E
Sbjct: 128 YGYHSSE 134


>ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222413 [Cucumis sativus]
          Length = 2868

 Score =  163 bits (413), Expect = 1e-38
 Identities = 82/127 (64%), Positives = 98/127 (77%), Gaps = 4/127 (3%)
 Frame = -3

Query: 370 LFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQKTCLHIHRALPY 191
           +FSVRIVSIDYY++PPI  LDISYS+FQG KVNEVPV+RIYGSTPAGQKTC+H+H  LPY
Sbjct: 10  VFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHGVLPY 69

Query: 190 LYVPCSSSI----QSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGCSLVRAKKF 23
           LYVPCS  +         GE    +++ A+EKAL  K+K +SG KRQHVHG +LVRAKK 
Sbjct: 70  LYVPCSEILLPLNDKGVGGEALGNNVSLALEKAL--KLKGNSGSKRQHVHGYNLVRAKKL 127

Query: 22  YGYYKPE 2
           YGY+  E
Sbjct: 128 YGYHSSE 134


>ref|XP_003626277.1| DNA polymerase [Medicago truncatula] gi|355501292|gb|AES82495.1|
           DNA polymerase [Medicago truncatula]
          Length = 1096

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/120 (66%), Positives = 97/120 (80%), Gaps = 1/120 (0%)
 Frame = -3

Query: 370 LFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQKTCLHIHRALPY 191
           +FSVRIVS+D+YM+ PI  +DIS+STF   KVNEVPVIR+YGSTPAGQKTCLHIH ALPY
Sbjct: 10  VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69

Query: 190 LYVPCSS-SIQSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGCSLVRAKKFYGY 14
           LYV CS   +Q  ++G+ Y   +A+++EKAL  K+K S+   RQHVHGCSLVRAKKFYGY
Sbjct: 70  LYVSCSDIPLQLDQEGDAYTYMVASSLEKAL--KLKGSADSSRQHVHGCSLVRAKKFYGY 127


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