BLASTX nr result
ID: Coptis24_contig00033639
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033639 (417 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36804.3| unnamed protein product [Vitis vinifera] 175 4e-42 ref|XP_002319016.1| predicted protein [Populus trichocarpa] gi|2... 170 1e-40 ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, par... 163 1e-38 ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 163 1e-38 ref|XP_003626277.1| DNA polymerase [Medicago truncatula] gi|3555... 162 3e-38 >emb|CBI36804.3| unnamed protein product [Vitis vinifera] Length = 1732 Score = 175 bits (443), Expect = 4e-42 Identities = 89/135 (65%), Positives = 106/135 (78%), Gaps = 1/135 (0%) Frame = -3 Query: 403 MENISQPDYNTLFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQK 224 MEN SQ D +FSVRIVS+DYYM+PPI DLDI YS+FQG V EVPVIRIYGSTP GQK Sbjct: 1 MEN-SQDDAK-IFSVRIVSMDYYMAPPIPDLDICYSSFQGGMVKEVPVIRIYGSTPVGQK 58 Query: 223 TCLHIHRALPYLYVPCSSSI-QSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGC 47 TCLH+HRALPYLYVPC+ + QS ++ + Y ++ +EKAL K+K ++G KRQHVHGC Sbjct: 59 TCLHVHRALPYLYVPCTDLMPQSPQEADTYTHAVSLGVEKAL--KLKGNAGSKRQHVHGC 116 Query: 46 SLVRAKKFYGYYKPE 2 SLVRAK FYGY+ E Sbjct: 117 SLVRAKNFYGYHSSE 131 >ref|XP_002319016.1| predicted protein [Populus trichocarpa] gi|222857392|gb|EEE94939.1| predicted protein [Populus trichocarpa] Length = 142 Score = 170 bits (430), Expect = 1e-40 Identities = 84/132 (63%), Positives = 103/132 (78%), Gaps = 2/132 (1%) Frame = -3 Query: 391 SQP-DYNTLFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQKTCL 215 SQP D + +FS+RIVSID+YMSPPI +DI YS+FQG KVNEVPVIR+YGSTPAGQKTCL Sbjct: 3 SQPADSSKIFSLRIVSIDHYMSPPIPGVDICYSSFQGGKVNEVPVIRVYGSTPAGQKTCL 62 Query: 214 HIHRALPYLYVPC-SSSIQSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGCSLV 38 H+HRA PYLYVPC I + +G Y R+I +++ + + +K + G KRQHVHGCSLV Sbjct: 63 HVHRAFPYLYVPCLDIPINGNREGMIYDRNIFSSL--CITINLKGNVGSKRQHVHGCSLV 120 Query: 37 RAKKFYGYYKPE 2 RAKKFYGY+ E Sbjct: 121 RAKKFYGYHSDE 132 >ref|XP_004168301.1| PREDICTED: uncharacterized LOC101230122, partial [Cucumis sativus] Length = 1591 Score = 163 bits (413), Expect = 1e-38 Identities = 82/127 (64%), Positives = 98/127 (77%), Gaps = 4/127 (3%) Frame = -3 Query: 370 LFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQKTCLHIHRALPY 191 +FSVRIVSIDYY++PPI LDISYS+FQG KVNEVPV+RIYGSTPAGQKTC+H+H LPY Sbjct: 10 VFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHGVLPY 69 Query: 190 LYVPCSSSI----QSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGCSLVRAKKF 23 LYVPCS + GE +++ A+EKAL K+K +SG KRQHVHG +LVRAKK Sbjct: 70 LYVPCSEILLPLNDKGVGGEALGNNVSLALEKAL--KLKGNSGSKRQHVHGYNLVRAKKL 127 Query: 22 YGYYKPE 2 YGY+ E Sbjct: 128 YGYHSSE 134 >ref|XP_004144825.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222413 [Cucumis sativus] Length = 2868 Score = 163 bits (413), Expect = 1e-38 Identities = 82/127 (64%), Positives = 98/127 (77%), Gaps = 4/127 (3%) Frame = -3 Query: 370 LFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQKTCLHIHRALPY 191 +FSVRIVSIDYY++PPI LDISYS+FQG KVNEVPV+RIYGSTPAGQKTC+H+H LPY Sbjct: 10 VFSVRIVSIDYYLAPPIPGLDISYSSFQGGKVNEVPVLRIYGSTPAGQKTCVHVHGVLPY 69 Query: 190 LYVPCSSSI----QSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGCSLVRAKKF 23 LYVPCS + GE +++ A+EKAL K+K +SG KRQHVHG +LVRAKK Sbjct: 70 LYVPCSEILLPLNDKGVGGEALGNNVSLALEKAL--KLKGNSGSKRQHVHGYNLVRAKKL 127 Query: 22 YGYYKPE 2 YGY+ E Sbjct: 128 YGYHSSE 134 >ref|XP_003626277.1| DNA polymerase [Medicago truncatula] gi|355501292|gb|AES82495.1| DNA polymerase [Medicago truncatula] Length = 1096 Score = 162 bits (409), Expect = 3e-38 Identities = 80/120 (66%), Positives = 97/120 (80%), Gaps = 1/120 (0%) Frame = -3 Query: 370 LFSVRIVSIDYYMSPPITDLDISYSTFQGVKVNEVPVIRIYGSTPAGQKTCLHIHRALPY 191 +FSVRIVS+D+YM+ PI +DIS+STF KVNEVPVIR+YGSTPAGQKTCLHIH ALPY Sbjct: 10 VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69 Query: 190 LYVPCSS-SIQSSEQGENYKRDIANAIEKALKVKIKSSSGLKRQHVHGCSLVRAKKFYGY 14 LYV CS +Q ++G+ Y +A+++EKAL K+K S+ RQHVHGCSLVRAKKFYGY Sbjct: 70 LYVSCSDIPLQLDQEGDAYTYMVASSLEKAL--KLKGSADSSRQHVHGCSLVRAKKFYGY 127