BLASTX nr result

ID: Coptis24_contig00033631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033631
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase A...   201   5e-50
emb|CBI37818.3| unnamed protein product [Vitis vinifera]              201   5e-50
ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putativ...   187   1e-45
ref|XP_004144865.1| PREDICTED: serine/threonine-protein kinase A...   177   1e-42

>ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase ATR-like [Vitis
           vinifera]
          Length = 2730

 Score =  201 bits (511), Expect = 5e-50
 Identities = 104/135 (77%), Positives = 116/135 (85%), Gaps = 2/135 (1%)
 Frame = +2

Query: 11  MEKLSSLVHELRERIAASTSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPSA--NEREVIA 184
           M  LSSLVHELRERIAAS+S+     D+  LE RFR+VLPNLLH YV+PS+  NEREVIA
Sbjct: 1   MANLSSLVHELRERIAASSSTPPNNGDDVVLETRFRAVLPNLLHTYVVPSSSENEREVIA 60

Query: 185 VLKLLSHTARNFPGVFYHGKANAVLPVIGRILPFFAEPAFISRHEVILETVGSLLSLLRT 364
           VLKLLSHT +NFPGVFYHGKA AVLP+IGRILPFFAEPAF SRH VI ETVGSLLSLLRT
Sbjct: 61  VLKLLSHTTKNFPGVFYHGKAGAVLPIIGRILPFFAEPAFRSRHGVIFETVGSLLSLLRT 120

Query: 365 GDREAFRQFFLDGML 409
           G+R+A+RQFF+D ML
Sbjct: 121 GERDAYRQFFIDAML 135


>emb|CBI37818.3| unnamed protein product [Vitis vinifera]
          Length = 2496

 Score =  201 bits (511), Expect = 5e-50
 Identities = 104/135 (77%), Positives = 116/135 (85%), Gaps = 2/135 (1%)
 Frame = +2

Query: 11  MEKLSSLVHELRERIAASTSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPSA--NEREVIA 184
           M  LSSLVHELRERIAAS+S+     D+  LE RFR+VLPNLLH YV+PS+  NEREVIA
Sbjct: 1   MANLSSLVHELRERIAASSSTPPNNGDDVVLETRFRAVLPNLLHTYVVPSSSENEREVIA 60

Query: 185 VLKLLSHTARNFPGVFYHGKANAVLPVIGRILPFFAEPAFISRHEVILETVGSLLSLLRT 364
           VLKLLSHT +NFPGVFYHGKA AVLP+IGRILPFFAEPAF SRH VI ETVGSLLSLLRT
Sbjct: 61  VLKLLSHTTKNFPGVFYHGKAGAVLPIIGRILPFFAEPAFRSRHGVIFETVGSLLSLLRT 120

Query: 365 GDREAFRQFFLDGML 409
           G+R+A+RQFF+D ML
Sbjct: 121 GERDAYRQFFIDAML 135


>ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|222848502|gb|EEE86049.1|
           predicted protein [Populus trichocarpa]
          Length = 2740

 Score =  191 bits (485), Expect = 5e-47
 Identities = 100/138 (72%), Positives = 117/138 (84%), Gaps = 8/138 (5%)
 Frame = +2

Query: 20  LSSLVHELRERIAAS------TSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPS--ANERE 175
           LSSLVHELRERIAA+      T++N   E++  LEIRFR+VLPNLLHAYV+PS  A+ERE
Sbjct: 6   LSSLVHELRERIAATSSTPPNTNTNTAAENDSALEIRFRAVLPNLLHAYVVPSSSASERE 65

Query: 176 VIAVLKLLSHTARNFPGVFYHGKANAVLPVIGRILPFFAEPAFISRHEVILETVGSLLSL 355
           VIAVLKL+SH ARNFPGVFYHGK +A+LPVIGR+LPFFAEPAF +RH VI +TVGSLLSL
Sbjct: 66  VIAVLKLISHIARNFPGVFYHGKGSAILPVIGRVLPFFAEPAFRARHGVIFDTVGSLLSL 125

Query: 356 LRTGDREAFRQFFLDGML 409
           LRTG R+A+ QFF+D ML
Sbjct: 126 LRTGARDAYCQFFIDAML 143


>ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putative [Ricinus communis]
           gi|223539506|gb|EEF41094.1| Serine/threonine-protein
           kinase ATR, putative [Ricinus communis]
          Length = 2822

 Score =  187 bits (474), Expect = 1e-45
 Identities = 97/132 (73%), Positives = 114/132 (86%), Gaps = 2/132 (1%)
 Frame = +2

Query: 20  LSSLVHELRERIAASTSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPS--ANEREVIAVLK 193
           LSSL+HELRERIAAS+S+   T D++ L  RFR+VLPNLLH+YV+PS  A+EREVIAVLK
Sbjct: 5   LSSLIHELRERIAASSSTPPNTIDDDALGNRFRAVLPNLLHSYVVPSSSASEREVIAVLK 64

Query: 194 LLSHTARNFPGVFYHGKANAVLPVIGRILPFFAEPAFISRHEVILETVGSLLSLLRTGDR 373
           L+SH A+NFPGVFYHGKA+AVLPVIGRI+PFFAEPAF SRH VI ETVGSLLSLLR G R
Sbjct: 65  LISHIAKNFPGVFYHGKASAVLPVIGRIIPFFAEPAFGSRHGVIFETVGSLLSLLRIGAR 124

Query: 374 EAFRQFFLDGML 409
           + + +FF+D ML
Sbjct: 125 DTYCKFFIDAML 136


>ref|XP_004144865.1| PREDICTED: serine/threonine-protein kinase ATR-like [Cucumis
           sativus]
          Length = 2716

 Score =  177 bits (448), Expect = 1e-42
 Identities = 95/134 (70%), Positives = 110/134 (82%), Gaps = 2/134 (1%)
 Frame = +2

Query: 11  MEKLSSLVHELRERIAASTSSNGGTEDNEPLEIRFRSVLPNLLHAYVLPSA--NEREVIA 184
           M  LS+LVHELRERIAAS SS     D+  LE+RFR+ LPNLLH +V+PS+  NEREV+A
Sbjct: 1   MANLSALVHELRERIAAS-SSTPNRADDFGLEVRFRAFLPNLLHDHVVPSSSVNEREVVA 59

Query: 185 VLKLLSHTARNFPGVFYHGKANAVLPVIGRILPFFAEPAFISRHEVILETVGSLLSLLRT 364
           VLKL+S TARNFPGVFYHGKA+A+LPVI RILPFFAE    ++H VI ETVGSLLSLLRT
Sbjct: 60  VLKLISITARNFPGVFYHGKASAILPVIARILPFFAETTIQAQHGVIFETVGSLLSLLRT 119

Query: 365 GDREAFRQFFLDGM 406
           G R+A+RQFFLD M
Sbjct: 120 GARDAYRQFFLDAM 133


Top