BLASTX nr result

ID: Coptis24_contig00033630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033630
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putativ...   166   2e-39
ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase A...   165   3e-39
emb|CBI37818.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|2...   156   1e-36
sp|Q5Z987.1|ATR_ORYSJ RecName: Full=Serine/threonine-protein kin...   152   2e-35

>ref|XP_002521238.1| Serine/threonine-protein kinase ATR, putative [Ricinus communis]
           gi|223539506|gb|EEF41094.1| Serine/threonine-protein
           kinase ATR, putative [Ricinus communis]
          Length = 2822

 Score =  166 bits (420), Expect = 2e-39
 Identities = 82/136 (60%), Positives = 99/136 (72%)
 Frame = -1

Query: 409 LLYVASISCGTXXXXXXXXXSLKCFSESFNGIIYSPHLFSDLPECCRPKDGPGILIDITD 230
           LLY AS+S            +LKCF +SF G++  P   SD+P   +P+DG GILI+IT 
Sbjct: 141 LLYAASLSVEAKNIPVSATVTLKCFCKSFAGVLSDPTCLSDVPAISKPQDGSGILINITS 200

Query: 229 KPRWQLFATWTIKIMSKCLTEGTLYVEGLINASFVSSACALLCYGDATLHMACFDFARIS 50
           K RWQ FATW IK++SKCLTEGTLYVEGLIN S V +AC+LLCYGDA LHMACFDFARI 
Sbjct: 201 KKRWQPFATWMIKLISKCLTEGTLYVEGLINMSNVWAACSLLCYGDADLHMACFDFARII 260

Query: 49  TAVIDAEIVPRENLIQ 2
            ++I  +I+P ENLIQ
Sbjct: 261 GSLIYDDIIPHENLIQ 276


>ref|XP_002278409.2| PREDICTED: serine/threonine-protein kinase ATR-like [Vitis
           vinifera]
          Length = 2730

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/136 (59%), Positives = 96/136 (70%)
 Frame = -1

Query: 409 LLYVASISCGTXXXXXXXXXSLKCFSESFNGIIYSPHLFSDLPECCRPKDGPGILIDITD 230
           +LYVA                +KCF ESF GI   P L SDLP   +P DG GI+I++TD
Sbjct: 140 ILYVAMHHADKASITESTRVLIKCFCESFTGISGDPALLSDLPTSSKPIDGFGIMINLTD 199

Query: 229 KPRWQLFATWTIKIMSKCLTEGTLYVEGLINASFVSSACALLCYGDATLHMACFDFARIS 50
           K RWQ FATW IK+M+KCLTEGTLYVEGL+N+ FVSSAC  LCYGDA L MACFDFAR+ 
Sbjct: 200 KSRWQPFATWIIKLMNKCLTEGTLYVEGLVNSPFVSSACTFLCYGDADLQMACFDFARVL 259

Query: 49  TAVIDAEIVPRENLIQ 2
            A+I+ +IVP +NLIQ
Sbjct: 260 GALINYDIVPHQNLIQ 275


>emb|CBI37818.3| unnamed protein product [Vitis vinifera]
          Length = 2496

 Score =  165 bits (418), Expect = 3e-39
 Identities = 81/136 (59%), Positives = 96/136 (70%)
 Frame = -1

Query: 409 LLYVASISCGTXXXXXXXXXSLKCFSESFNGIIYSPHLFSDLPECCRPKDGPGILIDITD 230
           +LYVA                +KCF ESF GI   P L SDLP   +P DG GI+I++TD
Sbjct: 140 ILYVAMHHADKASITESTRVLIKCFCESFTGISGDPALLSDLPTSSKPIDGFGIMINLTD 199

Query: 229 KPRWQLFATWTIKIMSKCLTEGTLYVEGLINASFVSSACALLCYGDATLHMACFDFARIS 50
           K RWQ FATW IK+M+KCLTEGTLYVEGL+N+ FVSSAC  LCYGDA L MACFDFAR+ 
Sbjct: 200 KSRWQPFATWIIKLMNKCLTEGTLYVEGLVNSPFVSSACTFLCYGDADLQMACFDFARVL 259

Query: 49  TAVIDAEIVPRENLIQ 2
            A+I+ +IVP +NLIQ
Sbjct: 260 GALINYDIVPHQNLIQ 275


>ref|XP_002305538.1| predicted protein [Populus trichocarpa] gi|222848502|gb|EEE86049.1|
           predicted protein [Populus trichocarpa]
          Length = 2740

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/136 (54%), Positives = 96/136 (70%)
 Frame = -1

Query: 409 LLYVASISCGTXXXXXXXXXSLKCFSESFNGIIYSPHLFSDLPECCRPKDGPGILIDITD 230
           +LYVAS S             LKCF +SF+GI   P   S LP   +P DG G+LI++T 
Sbjct: 167 ILYVASFSVENRNVPESGRIMLKCFCKSFSGIFDDPACISGLPASSKPDDGAGVLINVTG 226

Query: 229 KPRWQLFATWTIKIMSKCLTEGTLYVEGLINASFVSSACALLCYGDATLHMACFDFARIS 50
             RW  FATW +K++SKC+TEGTLYVEGLI+ + VS+AC+LLC+G+A LHMACFDFA + 
Sbjct: 227 TERWMTFATWMVKLLSKCVTEGTLYVEGLISLANVSAACSLLCFGNADLHMACFDFACVV 286

Query: 49  TAVIDAEIVPRENLIQ 2
           T+VID +IVP EN+I+
Sbjct: 287 TSVIDHDIVPHENMIR 302


>sp|Q5Z987.1|ATR_ORYSJ RecName: Full=Serine/threonine-protein kinase ATR
           gi|54291015|dbj|BAD61693.1| putative AtRAD3 [Oryza
           sativa Japonica Group] gi|54291614|dbj|BAD62537.1|
           putative AtRAD3 [Oryza sativa Japonica Group]
          Length = 2710

 Score =  152 bits (385), Expect = 2e-35
 Identities = 66/115 (57%), Positives = 91/115 (79%)
 Frame = -1

Query: 346 LKCFSESFNGIIYSPHLFSDLPECCRPKDGPGILIDITDKPRWQLFATWTIKIMSKCLTE 167
           +KC   SF+ I+ SP +FSDLP+ C+PK+GPG+L+D+T + RW+ FAT  IK+++KCL +
Sbjct: 164 VKCLCGSFSDILDSPGIFSDLPDSCQPKNGPGVLVDLTGETRWRPFATMLIKLVNKCLAD 223

Query: 166 GTLYVEGLINASFVSSACALLCYGDATLHMACFDFARISTAVIDAEIVPRENLIQ 2
           GTLYVEGL+N  FVS+AC+++CYGD +LH  CFDFARI   VI  EI+P EN+I+
Sbjct: 224 GTLYVEGLVNMPFVSAACSIICYGDESLHKVCFDFARIVATVITVEILPVENIIR 278


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