BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033627
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. glo...    62   4e-08
gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturon...    62   5e-08
ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana...    62   5e-08
ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabi...    62   5e-08

>ref|XP_002326133.1| predicted protein [Populus trichocarpa] gi|222833326|gb|EEE71803.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = +2

Query: 281 KIITILGNISFIGIHGQGVRVPVRLHGSDDIPLRNLTF 394
           K + ILG+ISF GIHGQGVRVPVR+HGS +IP+RN+TF
Sbjct: 397 KAVPILGDISFTGIHGQGVRVPVRIHGSQEIPVRNVTF 434


>gb|ABG34279.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
          Length = 201

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +2

Query: 281 KIITILGNISFIGIHGQGVRVPVRLHGSDDIPLRNLTFR 397
           K   IL  ISFIG+HGQGVRVPVR+HGS++IP+RN+TF+
Sbjct: 103 KAFPILQRISFIGVHGQGVRVPVRIHGSEEIPVRNVTFQ 141


>gb|AAF82228.1|AC069143_4 Contains similarity to a polygalacturonase-like protein gi|7529266
           from Arabidopsis thaliana BAC F18P9 gb|AL138654 and
           contains multiple polygalacturonase (pectinase) PF|00295
           domains [Arabidopsis thaliana]
          Length = 533

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +2

Query: 260 SESNETYKIITILGNISFIGIHGQGVRVPVRLHGSDDIPLRNLTFR 397
           ++ N   K   IL   SF GIHGQGVRVPVR+HGS+ IP+RN+TFR
Sbjct: 428 ADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFR 473


>ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
           gi|332191692|gb|AEE29813.1| Pectin lyase-like protein
           [Arabidopsis thaliana]
          Length = 506

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +2

Query: 260 SESNETYKIITILGNISFIGIHGQGVRVPVRLHGSDDIPLRNLTFR 397
           ++ N   K   IL   SF GIHGQGVRVPVR+HGS+ IP+RN+TFR
Sbjct: 401 ADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFR 446


>ref|XP_002890322.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297336164|gb|EFH66581.1| glycoside hydrolase
           family 28 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 506

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +2

Query: 260 SESNETYKIITILGNISFIGIHGQGVRVPVRLHGSDDIPLRNLTFR 397
           ++ N   K   IL   SF GIHGQGVRVPVR+HGS+ IP+RN+TFR
Sbjct: 401 ADDNYDRKAYPILSGFSFAGIHGQGVRVPVRIHGSEQIPVRNVTFR 446