BLASTX nr result

ID: Coptis24_contig00033624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033624
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284712.1| PREDICTED: uncharacterized protein LOC100264...   285   4e-75
ref|XP_002874364.1| hypothetical protein ARALYDRAFT_489571 [Arab...   277   1e-72
ref|NP_568497.1| uncharacterized protein [Arabidopsis thaliana] ...   274   6e-72
ref|XP_002512379.1| conserved hypothetical protein [Ricinus comm...   268   6e-70
ref|XP_002319008.1| predicted protein [Populus trichocarpa] gi|1...   267   8e-70

>ref|XP_002284712.1| PREDICTED: uncharacterized protein LOC100264831 [Vitis vinifera]
           gi|296088326|emb|CBI36771.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  285 bits (729), Expect = 4e-75
 Identities = 140/161 (86%), Positives = 147/161 (91%)
 Frame = -3

Query: 569 AFGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDDPPRPLIMWNPRLISEDV 390
           AFGFASLSDRKPVE+EDELVVMVVPDYQML YVERIA  LSDDPPRPLIMWNPRLISEDV
Sbjct: 190 AFGFASLSDRKPVEAEDELVVMVVPDYQMLAYVERIASNLSDDPPRPLIMWNPRLISEDV 249

Query: 389 GVGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFYDDKERPNRYLLAKEQIS 210
           GVGFNVRKLRR FLSTFT VYSMRP PAGAVFRCYPG WKVFYDDK+RPNRYLLAKEQIS
Sbjct: 250 GVGFNVRKLRRSFLSTFTVVYSMRPLPAGAVFRCYPGSWKVFYDDKDRPNRYLLAKEQIS 309

Query: 209 RPDAEDLEIIFGDVQEKSDNGPSLLDRAAGIFYSVN*FMKV 87
           RPDAE+LEIIFGDVQ+KS+ GPS   +AA IF S+N FMKV
Sbjct: 310 RPDAEELEIIFGDVQDKSEKGPSFFGQAASIFSSLNRFMKV 350


>ref|XP_002874364.1| hypothetical protein ARALYDRAFT_489571 [Arabidopsis lyrata subsp.
           lyrata] gi|297320201|gb|EFH50623.1| hypothetical protein
           ARALYDRAFT_489571 [Arabidopsis lyrata subsp. lyrata]
          Length = 340

 Score =  277 bits (708), Expect = 1e-72
 Identities = 133/159 (83%), Positives = 146/159 (91%)
 Frame = -3

Query: 566 FGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDDPPRPLIMWNPRLISEDVG 387
           FGFASLSDRKPVE EDE++VMVVPDYQMLEYVE+IAK L+DDPPRPLIMWNPRLISE+VG
Sbjct: 180 FGFASLSDRKPVEKEDEIIVMVVPDYQMLEYVEKIAKGLADDPPRPLIMWNPRLISEEVG 239

Query: 386 VGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFYDDKERPNRYLLAKEQISR 207
           VGFNVRKLRRYFLS+FTTVYSMRP  AGAVFRCYPG WKVFYD+K+RP RYLLAKE I R
Sbjct: 240 VGFNVRKLRRYFLSSFTTVYSMRPLAAGAVFRCYPGKWKVFYDNKDRPGRYLLAKELIGR 299

Query: 206 PDAEDLEIIFGDVQEKSDNGPSLLDRAAGIFYSVN*FMK 90
           PDAEDLEII+G V+EKS+ GPSLL +AAGIF S+N FMK
Sbjct: 300 PDAEDLEIIYGGVEEKSEEGPSLLSQAAGIFSSINRFMK 338


>ref|NP_568497.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13877993|gb|AAK44074.1|AF370259_1 unknown protein
           [Arabidopsis thaliana] gi|17104721|gb|AAL34249.1|
           unknown protein [Arabidopsis thaliana]
           gi|332006318|gb|AED93701.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 341

 Score =  274 bits (701), Expect = 6e-72
 Identities = 131/159 (82%), Positives = 145/159 (91%)
 Frame = -3

Query: 566 FGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDDPPRPLIMWNPRLISEDVG 387
           FGFASLSDRKPVE EDE++VMVVPDYQMLEYVE+IA  L+DDPPRPLIMWNPRLISE+VG
Sbjct: 181 FGFASLSDRKPVEKEDEIIVMVVPDYQMLEYVEKIANGLADDPPRPLIMWNPRLISEEVG 240

Query: 386 VGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFYDDKERPNRYLLAKEQISR 207
           VGFNVRKLRRYFLS+FTTVYSMRP  AGAVFRCYPG WKVFYD+K+RP RYLLAKE I R
Sbjct: 241 VGFNVRKLRRYFLSSFTTVYSMRPLAAGAVFRCYPGKWKVFYDNKDRPGRYLLAKELIGR 300

Query: 206 PDAEDLEIIFGDVQEKSDNGPSLLDRAAGIFYSVN*FMK 90
           PDAEDLEII+G V+EKS+ GPSL+ +AAGIF S+N FMK
Sbjct: 301 PDAEDLEIIYGGVEEKSEEGPSLMSQAAGIFSSINRFMK 339


>ref|XP_002512379.1| conserved hypothetical protein [Ricinus communis]
           gi|223548340|gb|EEF49831.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 343

 Score =  268 bits (684), Expect = 6e-70
 Identities = 131/160 (81%), Positives = 143/160 (89%), Gaps = 1/160 (0%)
 Frame = -3

Query: 566 FGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDDPPRPLIMWNPRLISEDVG 387
           FGFASLSDRKPVE+EDE+VVMVVPDYQML YVE+IA  LSDDPPRPLIMWNPRLISEDVG
Sbjct: 180 FGFASLSDRKPVENEDEIVVMVVPDYQMLGYVEKIASNLSDDPPRPLIMWNPRLISEDVG 239

Query: 386 VGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFYDDKERPNRYLLAKEQISR 207
           VG NVR LRRYFLS FTTVYSMRP P+GAVFRCYPG+WKVFYDDK+RPNRYLLAKE I R
Sbjct: 240 VGINVRNLRRYFLSAFTTVYSMRPLPSGAVFRCYPGMWKVFYDDKDRPNRYLLAKELIRR 299

Query: 206 PDAEDLEIIFGDVQEKSD-NGPSLLDRAAGIFYSVN*FMK 90
           PDAE+LEIIFG+  EKS+  GPS  ++AAGIF S+N FMK
Sbjct: 300 PDAEELEIIFGNGDEKSEQQGPSFFNQAAGIFSSLNRFMK 339


>ref|XP_002319008.1| predicted protein [Populus trichocarpa] gi|118487454|gb|ABK95555.1|
           unknown [Populus trichocarpa]
           gi|222857384|gb|EEE94931.1| predicted protein [Populus
           trichocarpa]
          Length = 339

 Score =  267 bits (683), Expect = 8e-70
 Identities = 126/161 (78%), Positives = 144/161 (89%)
 Frame = -3

Query: 569 AFGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDDPPRPLIMWNPRLISEDV 390
           AFGF+SLSDRKPV+ ED++VVMVVPDYQMLE V++I   LSDDPPRPLIMWNPRLISEDV
Sbjct: 176 AFGFSSLSDRKPVQIEDDIVVMVVPDYQMLEKVQKIVSDLSDDPPRPLIMWNPRLISEDV 235

Query: 389 GVGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFYDDKERPNRYLLAKEQIS 210
           GVG NVR LRRYFLSTFTTVYSMRP PAGAVFRCYP +WKVFYDDK+RPNRYLLA+E + 
Sbjct: 236 GVGINVRNLRRYFLSTFTTVYSMRPLPAGAVFRCYPEMWKVFYDDKDRPNRYLLAQESVR 295

Query: 209 RPDAEDLEIIFGDVQEKSDNGPSLLDRAAGIFYSVN*FMKV 87
           RPDAE++EIIFG+ +EKS+ GPSL  +AAGIF S+N FM+V
Sbjct: 296 RPDAEEIEIIFGNAEEKSEQGPSLFSKAAGIFSSLNRFMRV 336


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