BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033621
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containi...   134   6e-30
emb|CBI32403.3| unnamed protein product [Vitis vinifera]              134   6e-30
emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]   133   1e-29
ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containi...   131   6e-29
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26

>ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKACGCLSDGRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGRRVF 98
           +RPDF+T+P VLKACG L DGRKIH W FKLG+  ++FVA+SL+HMYSRFGF G  R +F
Sbjct: 214 IRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273

Query: 97  DEMSVRDLGTWNAMISGFCQNGKAVEALDV 8
           D+M  RD+G+WNAMISG  QNG A +ALDV
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGNAAQALDV 303



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKAC---GCLSDGRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGR 107
           ++ +F T   +L  C   G +S    IH +V K G   DLFV+++L++MY++FG + D R
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 106 RVFDEMSVRDLGTWNAMISGFCQNGKAVEALDVF 5
           + F +M + D+ +WN++I+ + QN   V A   F
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF 405



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/96 (28%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
 Frame = -1

Query: 274 RPDFFTY----PVVLKACGCLSDGRKIHSWVFKLGYCL-DLFVASSLLHMYSRFGFVGDG 110
           +PD  T      +V ++  C  + R +H ++ + G+ + D+ + ++++ MY++ G +   
Sbjct: 414 QPDLLTLVSLASIVAQSRDC-KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSA 472

Query: 109 RRVFDEMSVRDLGTWNAMISGFCQNGKAVEALDVFR 2
            +VF+ + V+D+ +WN +I+G+ QNG A EA++V++
Sbjct: 473 HKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 508


>emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/90 (66%), Positives = 73/90 (81%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKACGCLSDGRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGRRVF 98
           +RPDF+T+P VLKACG L DGRKIH W FKLG+  ++FVA+SL+HMYSRFGF G  R +F
Sbjct: 114 IRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 173

Query: 97  DEMSVRDLGTWNAMISGFCQNGKAVEALDV 8
           D+M  RD+G+WNAMISG  QNG A +ALDV
Sbjct: 174 DDMPFRDMGSWNAMISGLIQNGNAAQALDV 203


>emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  133 bits (335), Expect = 1e-29
 Identities = 59/90 (65%), Positives = 73/90 (81%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKACGCLSDGRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGRRVF 98
           +RPDF+T+P VLKACG L DGR+IH W FKLG+  ++FVA+SL+HMYSRFGF G  R +F
Sbjct: 214 IRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 273

Query: 97  DEMSVRDLGTWNAMISGFCQNGKAVEALDV 8
           D+M  RD+G+WNAMISG  QNG A +ALDV
Sbjct: 274 DDMPFRDMGSWNAMISGLIQNGNAAQALDV 303



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKAC---GCLSDGRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGR 107
           ++ +F T   +L  C   G +S    IH +V K G   DLFV+++L++MY++FG + D R
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDAR 371

Query: 106 RVFDEMSVRDLGTWNAMISGFCQNGKAVEALDVF 5
           + F +M + D+ +WN++I+ + QN   V A   F
Sbjct: 372 KAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF 405



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/96 (28%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
 Frame = -1

Query: 274 RPDFFTY----PVVLKACGCLSDGRKIHSWVFKLGYCL-DLFVASSLLHMYSRFGFVGDG 110
           +PD  T      +V ++  C  + R +H ++ + G+ + D+ + ++++ MY++ G +   
Sbjct: 414 QPDLLTLVSLASIVAQSRDC-KNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSA 472

Query: 109 RRVFDEMSVRDLGTWNAMISGFCQNGKAVEALDVFR 2
            +VF+ + V+D+ +WN +I+G+ QNG A EA++V++
Sbjct: 473 HKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYK 508


>ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  131 bits (329), Expect = 6e-29
 Identities = 60/91 (65%), Positives = 73/91 (80%)
 Frame = -1

Query: 280 RVRPDFFTYPVVLKACGCLSDGRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGRRV 101
           + + DF+T+P VLKAC  L DGRKIH WVFKLG+  D+FVA+SL+HMYSRFGFVG  R +
Sbjct: 170 KFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSL 229

Query: 100 FDEMSVRDLGTWNAMISGFCQNGKAVEALDV 8
           FD+M  RD+G+WNAMISG  QNG A +ALDV
Sbjct: 230 FDDMPFRDMGSWNAMISGLIQNGNAAQALDV 260



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKAC---GCLSDGRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGR 107
           +  D  T   +L  C   G +S    IH +V K G   +LFV+++L++MY++FG +GD +
Sbjct: 269 INMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQ 328

Query: 106 RVFDEMSVRDLGTWNAMISGFCQNGKAVEALDVF 5
           +VF +M +RD+ +WN++I+ + QN   V A   F
Sbjct: 329 KVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFF 362



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 23/74 (31%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
 Frame = -1

Query: 220 DGRKIHSWVFKLGYCLD-LFVASSLLHMYSRFGFVGDGRRVFDEMSVRDLGTWNAMISGF 44
           + R +H ++ + G+ ++ + + ++++ MY++ G +    +VF+ + V+D+ +WN +ISG+
Sbjct: 392 NSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGY 451

Query: 43  CQNGKAVEALDVFR 2
            QNG A EA++V+R
Sbjct: 452 TQNGLASEAIEVYR 465


>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/90 (62%), Positives = 71/90 (78%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKACGCLSDGRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGRRVF 98
           VRPDF+T+P VLKAC  L+DG K+H WV K+G+  D++VA+SL+H+YSRFG V    +VF
Sbjct: 146 VRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVF 205

Query: 97  DEMSVRDLGTWNAMISGFCQNGKAVEALDV 8
            +M VRD+G+WNAMISGFCQNG   EAL V
Sbjct: 206 VDMPVRDVGSWNAMISGFCQNGNVAEALRV 235



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKACGCLSD---GRKIHSWVFKLGYCLDLFVASSLLHMYSRFGFVGDGR 107
           V+ D  T   +L  C   +D   G  +H +V K G   D+FV+++L++MYS+FG + D +
Sbjct: 244 VKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQ 303

Query: 106 RVFDEMSVRDLGTWNAMISGFCQNGKAVEALDVFR 2
           RVFD M VRDL +WN++I+ + QN   V AL  F+
Sbjct: 304 RVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFK 338



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/95 (34%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
 Frame = -1

Query: 277 VRPDFFTYPVVLKACGCLSD---GRKIHSWVFKLGYC-LDLFVASSLLHMYSRFGFVGDG 110
           +RPD  T   +    G LSD   GR +H +V +  +  +D+ + ++L++MY++ G +   
Sbjct: 345 MRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCA 404

Query: 109 RRVFDEMSVRDLGTWNAMISGFCQNGKAVEALDVF 5
           R VF+++  RD+ +WN +I+G+ QNG A EA+D +
Sbjct: 405 RAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY 439